Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1300 ATGGTACCCCAAACAATGCAATCAATGGCTAAACGCCTTACATTATCAGCATCAGAAGACAATGCAGTGGTGAAACAAATTGTTGCCACTCATGCTCCTGTTGATGGACATATTGATGTTAGACCTCTTCTTAATGTTGTTCAAGACATCTTTCACCGTATCGCCACTGCCATCCCTCCCGTAGTTCAGGGGAAGCAAGCAAACTTGGATGTGTTGGGTGACAATGCTTTTGCTCCTCACATGCTTGATAATATATCCAACATAATCCGCAAAATTTCCTGCCAGATATCTTACAACTGTTCTACTGGAGGAAACTCTCATTCAACAACTATGGGAATTCTGGGAATGCTTTCAAACTATTCATGGGATTCAAAGGTGGTGATAGCATTAGCAGCCTTTGCTTTGAACTTTGGGGAGATCCGGTTGATAACTCAGCTTTATACCACCAACTCTCTTGCTACGTCTATTGCAATGTTGAAGCATGTTCCTGAAACACAGAATCAAGAGGGTATTCTGGGACTGCAGCATAGGTATGAAGCGATCAGCAACATTGTCAAGGTCATGTTGGATCTCACCCATTGCATTGTGGCATTTGAGGACCTCCCCTCTCAGTGCAAAACACCCGATACGCCGCAGATGTCAGCTGCTGCCACTTTGATTCCCGTTGCTGTCTATTGGACCATTCGGAGTATTGTGGCTTGTGCATCACATATTTCAGGCTTCCTGAGCATGAATCAACGTATAGCATCAATGTCAGAGGCTTGGGAACTTTCGAGTCTGGTTCACAAGCTCAATAACATACACAACCACCTTCAGACTCAGCTTGCCCTTTTACAGAAGCAGATAGATGATAACAAACAAACTGAAGCTTTTGAGACACTTGTACGCCTTTTTGATGCATCTCAGCCTGACAATTGGGAAATTCTTCAAGGTTTGTTTTACTTCAAGGATGATCAACTACCACTTCTTGATGGTTCTACCAAGCAAAGGGTTAGATTTCAATATCTTGATCTATCTGACCAAGAGATTATGATTCTTGGAGAAATGTATCTCGAGACACGTCAGGAACCAGACATGTTTCCGATTCCATTTGATGTCGTTTGGCTTCCGGTTGTGAATAAGGCGATCCCACGGACTGAAGTGAAACGGAAGAAGTTGGAGGACCTACAATCCACAATGCCATGGTACTCAATCTATGACCCTTGGCAGATAAAGCAAGCAGTGATTAAGTACATTAATGATGTGTGGCATTTCAAGAAGAAGCCTATACTTGTTGTTTTGGACCAGCAAGGAAAAGTTGTCAACCTAAACGCTCTACACATTATGTGGATTTGGGGATGCTTGGCGTACCCTTTCGCAGTCTCCGACGAGGAATCCATCTGGAAGGAACAAACATGGGGACTTCAGCTATTGGCAGATATGTTTTGTCCGTTAAGCTGGATATCAGAAGGGAAATACGTATGCTTGTATGGAGGTGAAGATCTTGAGTGGATTAGGAAATTCACAAGAAGAGCATATGCAATGGCTGAGACTCTGAAAATCCCACTTGAAATGATATACATGGGAAGAAGCAATCCAGGGAAGAAAGTGGAGAAGAACAAGGAAGCCATAATTTCAGAGAAGCTGAGCTATGCACTTGAGGACCTGACATTAATATGGTACTTCTGGGTTAGGGTAGAGAGCATGTGGCACTCCAAGTTACATCAAGGGAAGACAATAGAGAGTGACCCAATAATGCAGGAAGTGATGACAATCGTGAGCTTCGATCGAAGTGACGAAGGATGGGCCGTGATGAGCAGAGGAACAGAGAAGATGGTGAAAGCAAAAGGAGAAACATTTCTGAAATGTGTGAATGAGTATCAGAAATGGAAGGACAAGGCAAGAGAGAAAGGGGTTTTGATAGCAATGGATGAATATATACAAGAGCTAAGAACACCACACCATTACAATAGATTGATAGTTCCAGGAAGTAATGACAGAAGCCTGGAGAAAGTTACCTGTGCTGAATGTGGCCGTCCCATGGAAAAGCTCTTCATGTACCGTTGCTGCAATGATTATTGA 2061 0.4313 MVPQTMQSMAKRLTLSASEDNAVVKQIVATHAPVDGHIDVRPLLNVVQDIFHRIATAIPPVVQGKQANLDVLGDNAFAPHMLDNISNIIRKISCQISYNCSTGGNSHSTTMGILGMLSNYSWDSKVVIALAAFALNFGEIRLITQLYTTNSLATSIAMLKHVPETQNQEGILGLQHRYEAISNIVKVMLDLTHCIVAFEDLPSQCKTPDTPQMSAAATLIPVAVYWTIRSIVACASHISGFLSMNQRIASMSEAWELSSLVHKLNNIHNHLQTQLALLQKQIDDNKQTEAFETLVRLFDASQPDNWEILQGLFYFKDDQLPLLDGSTKQRVRFQYLDLSDQEIMILGEMYLETRQEPDMFPIPFDVVWLPVVNKAIPRTEVKRKKLEDLQSTMPWYSIYDPWQIKQAVIKYINDVWHFKKKPILVVLDQQGKVVNLNALHIMWIWGCLAYPFAVSDEESIWKEQTWGLQLLADMFCPLSWISEGKYVCLYGGEDLEWIRKFTRRAYAMAETLKIPLEMIYMGRSNPGKKVEKNKEAIISEKLSYALEDLTLIWYFWVRVESMWHSKLHQGKTIESDPIMQEVMTIVSFDRSDEGWAVMSRGTEKMVKAKGETFLKCVNEYQKWKDKAREKGVLIAMDEYIQELRTPHHYNRLIVPGSNDRSLEKVTCAECGRPMEKLFMYRCCNDY 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1300 686 Pfam Sieve element occlusion C-terminus 456 684 IPR027944 -
Lele24g1300 686 Pfam Sieve element occlusion N-terminus 18 300 IPR027942 -
Lele24g1300 686 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 7 684 IPR039299 GO:0010088
Lele24g1300 686 Coils Coil 261 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1300 Lele-ChrLele24 19026594 19030291 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g1300 24 19026594 19030291 Lele24g1300 24 19026594 19030291 ECH
Lele22g1343 22 19229863 19233565 Lele24g1300 24 19026594 19030291 hybridization