Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1343 ATGGTACCCCAAACAATGCAATCAATGGCTAAACGCCTTACATTATCAGCATCAGAAGATAATGCAGTGGTGAAACAAGTTGTAGCCACTCATGCTCCTGTTGATGGACATATTGATGTTAGACCTCTTCTTAATGTTGTTCAAGACATCTTTCACCGTATCGTCACTGCCATCCCTCCCGTTGTTCAGGGGAAGCAAGCAAACTTGGATGCGTTGGGTGACAATGCTTTTGCTCCTCACATGCTTGATAATATATCCAACATAATCCGCAAAATTTCCTGCCAGATATCTTACAACTGTTCTACTGGCGGCAACTCTCATCCAACAACTATGGGAATTCTGGGAATGCTTTCAAGCTATTCATGGGATTCAAAGGTGGTGATAGCATTGGCAGCCTTTGCTTTGAACTTTGGGGAGATCCGGTTGATAACTCAGCTTTATACCACCAACTCTCTTGCTACGTCTATTGCAATATTGAAGCATGTTCCTGAAACACAGAATCAAGAGGATATTCTGGGACTGCAGCATAGGTATGAAGTGATCAGCAACATTGTCAAGGTCATGTTGGATCTCACCCATTGCATTGTGGCATTTGAGGACCTCCCCTCTCAGTGCAAAACACCCGATACGCCGCAGAAGTCAGCTGCAACCACTTTGATTCCCGTTGCTGTCTATTGGACCATTCGGAGTATTATGGCTTGTGCATCACATATTTCAGGCTTCCTGAGCATTAATCAACGTATAGCATCAATGTCAGAGGCTTGGGAACTTTCGAGTCTGGTTCATAAGCTCAATAACATACACAACCACCTTCAGACTCAGCTTGCCCTTTTACAGAAGCAGATAGATGATAACAAACAAACTGAAGCTTTTGAGACACTTGTACGCCTTTTTGATGCATCTCAGCCTGACAATTGGGAAATTCTTCAAGGTTTGTTTTACTTCAAGGATGATCAACTACCACTTCTTGATGGTTCTACCAAGCAAAGGGTAGGCATTGATGTATTGAGGAGTAAAATTGTGCTGCTATTCATATCAGATCTTGATCTCTCTGACCAAGAGATCATGATTCTTGGAGAAATGTATCTCGAGGCACGTCAGGAACCAGACATGTTTCCGATTCCATTTGATGTCGTTTGGCTTCCGGTTGTGAACAAGGCGATCCCATGGACTGAAGTGAAACGGAAGAAGTTGGAGGACCTACAATCCACAATGCCATGGTACTCAATCTATGACCCTTGGCAGATAAAGCAAGCAGTGATTAAGTACATTAATGATGTGTGGCATTTCAAGAAGAAGCCTATACTTGTTGTTTTGGACCAGCAAGGAAAAGTTGTCAACCTAAACGCTCTACACATTATGTGGATTTGGGGATGCTTGGCGTACCCTTTCGCAGTCTTCGACGAGGAATCCATCTGGAAGGAACAAACATGGGGACTTCAGCTATTGGCAGATATGTTTTGTCCATTAAGCTGGATATCAGAAGGGAAATACGTATGCTTGTATGGAGGTGAAGATCTTGAGTGGATTAGGAAATTCACAAGAAGGGCATATGCAATGGCTGAGACTCTGAAAATCCCACTTGAAATGATATACATGGGAAGAAGCAATCCAGGGGAGAAAGTGGAGAAGAACAAGGAAGCCATAATTTCAGAGAAGCTGAGCTATGCACTTGAGGACCTGACATTAATATGGTACTTCTGGGTTAGGGTAGAGAGCATGTGGCACTCCAAGTTACATCAAGGGAAGACAGTAGAGAGTGACTCAATAATGCAGGAAGTGATGACAATCGTGAGCTTCGATCGAAGTGACGAAGGATGGGCCGTGATGAGCAGAGGAACAGAGAAGATGGTGAAAGCAAAAGGAGAAACATTTCTGAAATGTGTGAATGAGTATCAGAAATGGAAGGACAAGGCAAGCGAGAAAGGGGTTTTGATAGCAATGGATGAATATATACAAGAGCTAAGAACACCACACCATTGCAATAGATTGATAGTTCCAGTAAGTAATGACAGAAGCCTGGAGGAAGTTACCTGTGGTGAATGTGGCCGTCCCATGGAAAAGCTCTTCATGTTCCGTTGCTGCAATGATTATTGA 2097 0.4325 MVPQTMQSMAKRLTLSASEDNAVVKQVVATHAPVDGHIDVRPLLNVVQDIFHRIVTAIPPVVQGKQANLDALGDNAFAPHMLDNISNIIRKISCQISYNCSTGGNSHPTTMGILGMLSSYSWDSKVVIALAAFALNFGEIRLITQLYTTNSLATSIAILKHVPETQNQEDILGLQHRYEVISNIVKVMLDLTHCIVAFEDLPSQCKTPDTPQKSAATTLIPVAVYWTIRSIMACASHISGFLSINQRIASMSEAWELSSLVHKLNNIHNHLQTQLALLQKQIDDNKQTEAFETLVRLFDASQPDNWEILQGLFYFKDDQLPLLDGSTKQRVGIDVLRSKIVLLFISDLDLSDQEIMILGEMYLEARQEPDMFPIPFDVVWLPVVNKAIPWTEVKRKKLEDLQSTMPWYSIYDPWQIKQAVIKYINDVWHFKKKPILVVLDQQGKVVNLNALHIMWIWGCLAYPFAVFDEESIWKEQTWGLQLLADMFCPLSWISEGKYVCLYGGEDLEWIRKFTRRAYAMAETLKIPLEMIYMGRSNPGEKVEKNKEAIISEKLSYALEDLTLIWYFWVRVESMWHSKLHQGKTVESDSIMQEVMTIVSFDRSDEGWAVMSRGTEKMVKAKGETFLKCVNEYQKWKDKASEKGVLIAMDEYIQELRTPHHCNRLIVPVSNDRSLEEVTCGECGRPMEKLFMFRCCNDY 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1343 698 Pfam Sieve element occlusion N-terminus 18 300 IPR027942 -
Lele22g1343 698 Coils Coil 261 288 - -
Lele22g1343 698 Pfam Sieve element occlusion C-terminus 469 696 IPR027944 -
Lele22g1343 698 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 7 696 IPR039299 GO:0010088
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1343 Lele-ChrLele22 19229863 19233565 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1343 22 19229863 19233565 Lele22g1343 22 19229863 19233565 ECH
Lele22g1343 22 19229863 19233565 Lele23g0677 23 5214812 5218613 hybridization
Lele22g1343 22 19229863 19233565 Lele24g1300 24 19026594 19030291 hybridization