Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1297 ATGAATAAGAAAAAGTTCGGTTTTCGAAATCAGAAATTGCTTCCAGCGTCATCATTGCGTCGGCGTGTGTGGACTATGAAGCTTCAAAGGTATTCAGAGCGTCGCAGGGTCTATGGGTATGAGAAACGGAACTTATTCCAGCAATGTTCAGAACTCTATGTTGCTTTGGCTGCTTACCTCTATATTTGCTTTGAATTCGAAAGAGTAACATCAAGAATGGGATTGGCTCTTCTTGACCTCTTACAGAAAGTATCTTGCTGGGTTGTTCAAATTCCCTATCTGGTTGAGCAATTACTTGATGTACAAATATATCTACCTGTGCAAGTTCTTAATCATGGGGAATTCCAAGATCGAACACAGCTGCTGTTGGTAGGTATTTCTGCTCTATGTGCCGAGAGAGGAATCAAATCACATTTGCTTCTACGAGGAGAGCAACCTGAAATCTTGACTGGCTATAACTTGATGTCCACAATATATGGAAATGTGATATATGTTCCAAGATCTATTTATGCCAACCGTGAAGAGATGCTAAAGAACCACGCCAAGTTGGTCGCCAGTAACAATGATTCTGTAGTATGGTTAAATGATATCATTGAAGCTTCAACAGATGGCTTGTCTACTTCCCCTACATTAGCAGAAATGGATGCTAGTGGAAATGCTAGAAACCATCTAAGAAAGATTTTAATAATTAACGAGGGCGCATCTGATTCTGTAGCTCTACTAGGTGTGATTCGGTTAGTGCAATACTTGTCAAAGAATCATTTATTTGGAAGAAGGGCCTTGAGATTTGTTGTAGATGCTGGTACTGGGACAACAGCTATTGGTTTAGGACTTGCTGCCCTATGTTTGGGACTCCCATGGGAGATCTATGCAGTCATGCTGGCTGGCACAATCGATGTATATAGAGAAAAGGAAGAACGATTAATTTCTGAATTTAAGAAGCATTTTAATGTTCAGTTTATTGACCACAGTGTGAACAAAGAGGGTGCCAGAATCGTGCATTGGGTGGAACGGTCTCGTCCAAGGAAATTTGGAAAAGTTTTGGAAGGGGAAATGCAAGCATGCCAGCAAGTTGCACAACCAACTGGGATTCTGGTGGATCCTGTGTACACTCTGGCTGCTTGGGAAAGGGCTACGCTTCTGTGTAAAGAAGAAGCTAAAGAAGGATCAGATGTGGTGTTGCTTCACACTGGAGGCACTTTGGGCATGTTTGGGTTAGCTCAGAGGTACAAAAATTACTTTGTCAATCTTTGA 1254 0.4163 MNKKKFGFRNQKLLPASSLRRRVWTMKLQRYSERRRVYGYEKRNLFQQCSELYVALAAYLYICFEFERVTSRMGLALLDLLQKVSCWVVQIPYLVEQLLDVQIYLPVQVLNHGEFQDRTQLLLVGISALCAERGIKSHLLLRGEQPEILTGYNLMSTIYGNVIYVPRSIYANREEMLKNHAKLVASNNDSVVWLNDIIEASTDGLSTSPTLAEMDASGNARNHLRKILIINEGASDSVALLGVIRLVQYLSKNHLFGRRALRFVVDAGTGTTAIGLGLAALCLGLPWEIYAVMLAGTIDVYREKEERLISEFKKHFNVQFIDHSVNKEGARIVHWVERSRPRKFGKVLEGEMQACQQVAQPTGILVDPVYTLAAWERATLLCKEEAKEGSDVVLLHTGGTLGMFGLAQRYKNYFVNL 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1297 417 Gene3D - 205 413 IPR036052 -
Lele24g1297 417 FunFam D-cysteine desulfhydrase 2 mitochondrial 214 413 - -
Lele24g1297 417 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE-RELATED 127 415 IPR027278 -
Lele24g1297 417 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 123 411 IPR036052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1297 Lele-ChrLele24 18966428 18971246 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g1297 24 18966428 18971246 Lele24g1297 24 18966428 18971246 ECH
Lele21g1343 21 21870607 21880251 Lele24g1297 24 18966428 18971246 hybridization
Lele22g1340 22 19179174 19184072 Lele24g1297 24 18966428 18971246 hybridization