Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1231 ATGCAGTCCGTCTTTGAGTCTAAGGAGGATGCGTTTGTTGTGCAGGCCGCACACAAGAAGTCCAGGGATTCTAGTGGAACCAAAGAATTTGATTGCAAGGTGATTGAAGAGGTGGTTTCAGCAGTTAAGGATGACCCATCTGATGAGAATCTGGTGAAGTTGCTACAGTTAGTTTGTGGCTATGATTCTTTTCGGGATGGTCAGTTGGAGGCAATCAAGATGTTACCTGCAATGATTTTACCTGGAATTACCCTGGTCGTCAGTCCATTGGTAGCCTTGATGATTGATCAACATAGAAAATTGCCTCCTACTATTAATGGAAGACTTCTATGCAGCAGTCAGACCCCTGAAGAAGCTTCTGAAACGCTGAAGCATCTTCAAGAAGGTCCATTAAAGTCTAAAGCTTGCTTTTTCCTTTATAATTTGTATTCAGGTCACAATTTTCGCCCTTCCTTCATGAGGGTTAGGGCATCTTTTCTCCACAAGAAGCTAAATGCAGGTTCTTTTCTGGCAATGACAGCAGCAGCTACAACCATAACATTAAATTCCATCATGTCTGCTTTAGATAGTCCTTGCACAAATCTTATTCAGAAGACAGAGTTAACAGACAATTTGCATTTATCGTTCAAAGCATCATCATATACTGCAAATTTCAGGAAGGGCATACAGCGTAAAAGAAATCAGCGATTCACATTGTTTTCGAAAGATCCGAGAGCCATGGATGAGGTCGCTGCCACATCGGCATCGGTGATGCGCACTTCAACGTCTTTGTCGTCGTATTCGTCATCTTCTTCAGCGTCTTCATCAGTATTTACTAATTATCCCCTCATTTCTGCTATCGCTGCTTTCTCCATTGCCCAATCTACCAAATTCTTCACATCATGGTACAAGGAGAGAAGATGGGATTTTAAGCAACTTGTTGGTTCTGGTGGAATGCCATCATCTCATTCAGCAACAGTAACCGCTCTTGCAGCATCTATTGGGTTTCAAGAGGGGTTTGGAGGACCTCTGTTCGCTACTGCATTGACCTTAGCTTGTATTGTAATGTATGATGCTACTGGTGTAAGATTACAAGCTGGTCGCCAAGCAGAGGTTTTGAATCAAATTGTATATGAACTTCCGGCTGAACATCCTCTAGCTGAAAGAGGACCACTTCGTGAACTTCTTGGGCATACCCCTCCACAGGTGGTTGCTGGTTTGTTACTTGGAATATTTACAGCAGCTATTGGCCATCTAATAACCATGATCAAATAA 1254 0.4258 MQSVFESKEDAFVVQAAHKKSRDSSGTKEFDCKVIEEVVSAVKDDPSDENLVKLLQLVCGYDSFRDGQLEAIKMLPAMILPGITLVVSPLVALMIDQHRKLPPTINGRLLCSSQTPEEASETLKHLQEGPLKSKACFFLYNLYSGHNFRPSFMRVRASFLHKKLNAGSFLAMTAAATTITLNSIMSALDSPCTNLIQKTELTDNLHLSFKASSYTANFRKGIQRKRNQRFTLFSKDPRAMDEVAATSASVMRTSTSLSSYSSSSSASSSVFTNYPLISAIAAFSIAQSTKFFTSWYKERRWDFKQLVGSGGMPSSHSATVTALAASIGFQEGFGGPLFATALTLACIVMYDATGVRLQAGRQAEVLNQIVYELPAEHPLAERGPLRELLGHTPPQVVAGLLLGIFTAAIGHLITMIK 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1231 417 PANTHER ACID PHOSPHATASE/VANADIUM-DEPENDENT HALOPEROXIDASE-RELATED PROTEIN 252 413 IPR003832 -
Lele24g1231 417 Gene3D - 20 140 IPR027417 -
Lele24g1231 417 CDD PAP2_like 291 409 - -
Lele24g1231 417 Pfam Divergent PAP2 family 272 405 IPR003832 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1231 Lele-ChrLele24 16318890 16324832 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele16g2174 16 17122482 17125224 Lele24g1231 24 16318890 16324832 CCT
Lele21g1303 21 21203394 21205586 Lele24g1231 24 16318890 16324832 hybridization
Lele22g1300 22 18515049 18517666 Lele24g1231 24 16318890 16324832 hybridization