Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1300 ATGGATGAGATCGCTGTCACATCGGCATCGGGGATGCGCTCTTCAACGTCTTTGTCGTCGTCGTCGTCGTCTTCAGCGTCTTCATCAGTATTTACTAATTATCCCCTCATTTCTGCTATCGCTGCTTTCTCCATTGCCCAATCTACCAAATTCTTCACATCATGGTACAAGGAAAGAAGATGGGATTTTAAGCAACTTGTTGGTTCTGGTGGAATGCCATCATCTCATTCAGCAACAGTAACCGCTCTTGCAGCATCTATTGGGTTTCAAGAGGGGTTTGGAGGACCTCTGTTCGCTACTGCATTGACCTTAGCTTGTATTGTAATGTATGATGCTACTGGTGTAAGATTACAAGCTGGACGCCAAGCAGAGGTTTTGAATCAAATTGTATATGAACTTCCGGCTGAACATCCTCTAGCTGAAAGAGGACCACTTCGTGAACTTCTTGGGCATACCCCTCCTCAGGTGGTTGCTGGTTTGTTACTTGGAATCTTTACAGCAGCTATTGGCCATCTAATAACCATGATCAAATAA 534 0.4457 MDEIAVTSASGMRSSTSLSSSSSSSASSSVFTNYPLISAIAAFSIAQSTKFFTSWYKERRWDFKQLVGSGGMPSSHSATVTALAASIGFQEGFGGPLFATALTLACIVMYDATGVRLQAGRQAEVLNQIVYELPAEHPLAERGPLRELLGHTPPQVVAGLLLGIFTAAIGHLITMIK 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1300 177 MobiDBLite consensus disorder prediction 8 28 - -
Lele22g1300 177 Pfam Divergent PAP2 family 32 165 IPR003832 -
Lele22g1300 177 MobiDBLite consensus disorder prediction 1 28 - -
Lele22g1300 177 PANTHER ACID PHOSPHATASE/VANADIUM-DEPENDENT HALOPEROXIDASE-RELATED PROTEIN 13 173 IPR003832 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1300 Lele-ChrLele22 18515049 18517666 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele16g2174 16 17122482 17125224 Lele22g1300 22 18515049 18517666 CCT
Lele22g1300 22 18515049 18517666 Lele23g0730 23 5844395 5846511 hybridization
Lele22g1300 22 18515049 18517666 Lele24g1231 24 16318890 16324832 hybridization