Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0644 ATGCAGTGCACTCTATCTCTCTCTTTCTCTCACAGCTCCGCTGCTCCCACTATTTCCAGATTACACCCTTATTCTCAGTGTTTCGCGCTCAGTGATAATGGAAGGCTTTTGAATTTACGCTTCTGCGGTTTAAGGCGCGAGGCTTTAGGATTCAATTCTCTCAAGCTCAGTGATGCCCATAGTAGAGTGCAGCTCCCTAGCCGCAGGCACTTCAAGAAAGTTGCGGTTGCGTTGTCCGACAATGGGGCCCCTCCTAAATCGTTCGATTACGATTTGTTGATCATTGGGGCTGGCGTTGGAGGCCACGGGGCGGCGCTTCATGCCGTCGAGAAGGGTTTGAAAACGGCCATCGTTGAGGGAGATGCTGTAGGAGGAACATGTGTAAACAGAGGCTGTGTTCCTTCTAAAGCTCTTTTAGCAGTTAGTGGACGCATGCGTGAACTACAAAGTGAACATCATTTGAAATCCTTGGGCTTACAGGTCTCTGCTGCTGGGTATGACAGGCAGGGAGTAGCTGATCATGCTAATAACCTTGCTTCAAAAATCCGTAGTAATTTAACTAATTCATTAAAGGCACTTGGAGTAGACATACTCACAGGTTTTGGAACAATTTTGGGTCCTCAAAAGGTGCAAGTTGGTTCTCCAAACAGCATAGTAACTGCAAAAGATATAATCGTTGCAACTGGTTCCGTTCCTTTCGTTCCCAAGGGCATTGAAGTTGATGGGAAAACTGTGATTACCAGTGATCATGCACTCAAACTGGAATCTGTTCCTGATTGGATAGCAATTGTAGGAAGTGGTTACATTGGCCTTGAATTCAGTGATGTTTATACAGCTCTTGGAAGTGAGGTTACCTTCATTGAAGCCTTAGATCAACTTATGCCTGGATTTGATCCTGAAATTAGCAAGTTGGCTCAAAGGGTTCTGATAAATCCCCGAAATATTGACTATCATACTGGAGTTTTTGCCTCCAAGATCACTCCTGCAAGGGATGGGAAACCAGTTATGATTGAGCTCATTGATGCAAAGACCAAGGAACCTAAGGACACTTTGGAGGTGGATGCTGCACTAATAGCAACTGGAAGGGCTCCATTCACACAAGGACTTGGCTTGGAAAATATTGATGTTGAGACACAGCGTGGTTTTGTTCCTGTGGATGAGCGCATGAGAGTAATCGATGCAAAAGGAAATCTGGTGCCTCATTTATATTGTATTGGTGATGCAAATGGCAAGATGATGCTTGCTCATGCTGCCAGTGCTCAAGGAATTTCAGTGGTTGAACAAGTCACTGGAAGAGATTATGTTCTCAATCATTTAAGCATCCCAGCTGCTTGTTTCACTCATCCTGAAATCAGCATGGTTGGATTGACGGAGCCTCAAGCGAGGGAGAAAGGTGAAAAAGAAGGATTTGGAGTAAGTGTTGCCAAAACAAGTTTTAAAGCTAACACAAAGGCCCTAGCAGAAAATGAAGCGGAGGGACTTGCCAAGTTGATATACAGGCCTGACAATGGAGAGATACTAGGAGTTCACATATTCGGGTTGCATGCTGCAGATCTTATCCATGAAGCATCCAATGCAATCGCATTAGGGACACTTATTCAGGATATTAAATTCGCAGTTCATGCTCATCCAACTTTATCTGAGGTGCTTGATGAGCTATTTAAATCTGCAAAGGTCAAAGCACAAGCTTCTAGCCCAGTAAGTGAATCAGTTGCAGTCTAA 1722 0.4443 MQCTLSLSFSHSSAAPTISRLHPYSQCFALSDNGRLLNLRFCGLRREALGFNSLKLSDAHSRVQLPSRRHFKKVAVALSDNGAPPKSFDYDLLIIGAGVGGHGAALHAVEKGLKTAIVEGDAVGGTCVNRGCVPSKALLAVSGRMRELQSEHHLKSLGLQVSAAGYDRQGVADHANNLASKIRSNLTNSLKALGVDILTGFGTILGPQKVQVGSPNSIVTAKDIIVATGSVPFVPKGIEVDGKTVITSDHALKLESVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEISKLAQRVLINPRNIDYHTGVFASKITPARDGKPVMIELIDAKTKEPKDTLEVDAALIATGRAPFTQGLGLENIDVETQRGFVPVDERMRVIDAKGNLVPHLYCIGDANGKMMLAHAASAQGISVVEQVTGRDYVLNHLSIPAACFTHPEISMVGLTEPQAREKGEKEGFGVSVAKTSFKANTKALAENEAEGLAKLIYRPDNGEILGVHIFGLHAADLIHEASNAIALGTLIQDIKFAVHAHPTLSEVLDELFKSAKVKAQASSPVSESVAV 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0644 573 PRINTS FAD-dependent pyridine nucleotide reductase signature 387 409 - -
Lele24g0644 573 PRINTS FAD-dependent pyridine nucleotide reductase signature 221 239 - -
Lele24g0644 573 PRINTS FAD-dependent pyridine nucleotide reductase signature 260 278 - -
Lele24g0644 573 PRINTS FAD-dependent pyridine nucleotide reductase signature 353 369 - -
Lele24g0644 573 PRINTS FAD-dependent pyridine nucleotide reductase signature 92 111 - -
Lele24g0644 573 Gene3D - 90 428 IPR036188 -
Lele24g0644 573 PRINTS Pyridine nucleotide disulphide reductase class-I signature 437 458 - -
Lele24g0644 573 PRINTS Pyridine nucleotide disulphide reductase class-I signature 402 409 - -
Lele24g0644 573 PRINTS Pyridine nucleotide disulphide reductase class-I signature 506 521 - -
Lele24g0644 573 PRINTS Pyridine nucleotide disulphide reductase class-I signature 91 113 - -
Lele24g0644 573 PRINTS Pyridine nucleotide disulphide reductase class-I signature 260 285 - -
Lele24g0644 573 PRINTS Pyridine nucleotide disulphide reductase class-I signature 123 138 - -
Lele24g0644 573 PRINTS Pyridine nucleotide disulphide reductase class-I signature 354 368 - -
Lele24g0644 573 PRINTS Pyridine nucleotide disulphide reductase class-I signature 224 233 - -
Lele24g0644 573 PRINTS Pyridine nucleotide disulphide reductase class-I signature 528 548 - -
Lele24g0644 573 ProSitePatterns Pyridine nucleotide-disulphide oxidoreductases class-I active site. 124 134 IPR012999 GO:0016668
Lele24g0644 573 Gene3D - 440 564 IPR016156 GO:0016491|GO:0050660
Lele24g0644 573 SUPERFAMILY FAD/NAD-linked reductases, dimerisation (C-terminal) domain 440 554 IPR016156 GO:0016491|GO:0050660
Lele24g0644 573 SUPERFAMILY FAD/NAD(P)-binding domain 76 431 IPR036188 -
Lele24g0644 573 TIGRFAM lipoamide_DH: dihydrolipoyl dehydrogenase 90 560 IPR006258 GO:0004148|GO:0050660
Lele24g0644 573 FunFam Dihydrolipoyl dehydrogenase 440 564 - -
Lele24g0644 573 Pfam Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 441 552 IPR004099 -
Lele24g0644 573 PANTHER DISULFIDE OXIDOREDUCTASE 87 557 - -
Lele24g0644 573 FunFam Putative dihydrolipoyl dehydrogenase 233 360 - -
Lele24g0644 573 Gene3D - 233 360 IPR036188 -
Lele24g0644 573 Pfam Pyridine nucleotide-disulphide oxidoreductase 90 422 IPR023753 GO:0016491
Lele24g0644 573 PIRSF Hg-II_reductase_MerA 62 556 IPR001100 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0644 Lele-ChrLele24 4303662 4308848 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0644 1 565 Acyl Lipid Metabolism Gene Families AT3G16950 82.716 0.0 921
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g0644 24 4303662 4308848 Lele24g0644 24 4303662 4308848 ECH
Lele21g0654 21 4349586 4356075 Lele24g0644 24 4303662 4308848 hybridization
Lele22g0646 22 4267806 4273076 Lele24g0644 24 4303662 4308848 hybridization