Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0654 ATGCAGTCCTCTCTATCTCTCTCCTTCTCTCACAGTTCCGCTGCTCCCACCATTTCCAGATCACACCATTATTCTCAGTGTTTCGCTCCCAGTGATAATGGTAGTCTTTTGAATTTACGTTTCTGCGGTTTAAGGCGCGGGGCTTTAGGATTCAATTCTCTCAAGCTCAGTGATGCCAATCGTAGAGTGCAGCTCCCTAGCCAAGTCGCTGCTACGTGGTCCGACAATGGGGCCCCTGCTAAGTCGTTCGATTACGATTTGTTGATTATTGGGGCTGGTGTTGGAGGCCACGGGGCGGCGCTTCATGCCGTCGAGAAGGGTTTGAAAACGGCTATTATTGAGGGAGATGTTGTAGGAGGAACATGTGTAAACAGAGGCTGTGTCCCTTCTAAAGCTCTTTTGGCAGTTAGTGGACGAATGCGTGAACTACAAAGCGAGCATCATATGAAATCGTTGGGCTTACAGGTTTCTGCTGCTGGGTATGACAGGCAGGGAGTAGCTGATCATGCTAATAACCTTGCTTCAAAAATCCGTAGTAATTTGACCAATTCATTAAAGGCACTTGGAGTAGACATACTCACAGGTTTCGGAACAATTTTGGGTCCTCAAAAGGTGCAAGTTGGTTCTTCAAACAACATAGTAACTGCAAAAGATATAATCATTGCAACTGGTTCTGTTCCTTTCGTTCCCAAGGGCATTGAAGTTGATGGGAAGACAGTGATTACCAGTGATCATGCGCTCAAACTGGAATCTGTTCCTGATTGGATAGCAATTGTTGGAAGTGGTTACATTGGCCTTGAATTCAGTGATGTCTATACTGCTCTTGGAAGTGAGGTTACTTTCATTGAAGCCTTAGATCAACTTATGCCTGGATTTGATCCTGAAATTAGCAAGTTGGCTCAAAGGATTCTAATAAATCCCCGAAATATTGACTATCATACTGGAGTTTTTGCCTCCAAGATCACTCCCGCAAGGGATGGGAAACCAGTTATGATTGAGCTCATTGATGCAAAGACCAAGGAACCTAAGGACACTTTGGAGGTGGATGCTGCACTAATAGCTACTGGAAGGGCTCCGTTCACACAAGGACTTGGCTTGGAAAATATTGATGTTGTGACACAGCGTGGCTTTGTTCCTGTGGATGAGTGCATGAGAGTAATTGATGCAAAAGGAAATCTGGTGCCTCATTTATATTGTATTGGCGATGCAAATGGCAAGATGATGCTTGCTCATGCTGCCAGTGCTCAAGGAATTTCAGTGGTTGAACAAGTCACTGGCAGAGATTATGTTCTCAATCATTTAAGCATCCCAGCTGCTTGTTTCACTCATCCTGAAATCAGCATGGTTGGATTGACGGAGCCTCAAGCAAGGGAGAAAGGTGAAAAAGAAGGATTTGAAGTAAGTGTTACCAAAACAAGTTTTAAAGCTAACACAAAGGCCCTTGCAGAAAATGAAGCGGAGGGACTTGCCAAGTTGATATACAGGCCCGACAATGGAGAGATACTAGGAGTTCACATATTTGGGTTGCACGCTGCAGATCTTATCCATGAAGCATCCAATGCAATCGCATTAAGGACACGCATTCAGGACATAAAATTCGCAGTTCATGCTCATCCAACTTTATCTGAGGTGCTTGATGAGTTATTTAAATCTGCAAAGGGAGTTCCAAGATGAATCGAAATTGAAATTGAAATTGAAATTGAAATTGGAATTGGAATTGGAATTGGAATTGGAATTGGAATTGGAAGAGAAATGTAG 1758 0.4357 MQSSLSLSFSHSSAAPTISRSHHYSQCFAPSDNGSLLNLRFCGLRRGALGFNSLKLSDANRRVQLPSQVAATWSDNGAPAKSFDYDLLIIGAGVGGHGAALHAVEKGLKTAIIEGDVVGGTCVNRGCVPSKALLAVSGRMRELQSEHHMKSLGLQVSAAGYDRQGVADHANNLASKIRSNLTNSLKALGVDILTGFGTILGPQKVQVGSSNNIVTAKDIIIATGSVPFVPKGIEVDGKTVITSDHALKLESVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEISKLAQRILINPRNIDYHTGVFASKITPARDGKPVMIELIDAKTKEPKDTLEVDAALIATGRAPFTQGLGLENIDVVTQRGFVPVDECMRVIDAKGNLVPHLYCIGDANGKMMLAHAASAQGISVVEQVTGRDYVLNHLSIPAACFTHPEISMVGLTEPQAREKGEKEGFEVSVTKTSFKANTKALAENEAEGLAKLIYRPDNGEILGVHIFGLHAADLIHEASNAIALRTRIQDIKFAVHAHPTLSEVLDELFKSAKGVPRXIEIEIEIEIEIGIGIGIGIGIGIGREM 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0654 585 PRINTS Pyridine nucleotide disulphide reductase class-I signature 432 453 - -
Lele21g0654 585 PRINTS Pyridine nucleotide disulphide reductase class-I signature 86 108 - -
Lele21g0654 585 PRINTS Pyridine nucleotide disulphide reductase class-I signature 501 516 - -
Lele21g0654 585 PRINTS Pyridine nucleotide disulphide reductase class-I signature 523 543 - -
Lele21g0654 585 PRINTS Pyridine nucleotide disulphide reductase class-I signature 349 363 - -
Lele21g0654 585 PRINTS Pyridine nucleotide disulphide reductase class-I signature 118 133 - -
Lele21g0654 585 PRINTS Pyridine nucleotide disulphide reductase class-I signature 397 404 - -
Lele21g0654 585 PRINTS Pyridine nucleotide disulphide reductase class-I signature 255 280 - -
Lele21g0654 585 PRINTS Pyridine nucleotide disulphide reductase class-I signature 219 228 - -
Lele21g0654 585 Gene3D - 228 355 IPR036188 -
Lele21g0654 585 Pfam Pyridine nucleotide-disulphide oxidoreductase 85 417 IPR023753 GO:0016491
Lele21g0654 585 ProSitePatterns Pyridine nucleotide-disulphide oxidoreductases class-I active site. 119 129 IPR012999 GO:0016668
Lele21g0654 585 SUPERFAMILY FAD/NAD(P)-binding domain 72 426 IPR036188 -
Lele21g0654 585 PANTHER DISULFIDE OXIDOREDUCTASE 82 551 - -
Lele21g0654 585 FunFam Putative dihydrolipoyl dehydrogenase 228 355 - -
Lele21g0654 585 FunFam Dihydrolipoyl dehydrogenase 435 560 - -
Lele21g0654 585 Pfam Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 436 547 IPR004099 -
Lele21g0654 585 Gene3D - 435 557 IPR016156 GO:0016491|GO:0050660
Lele21g0654 585 PRINTS FAD-dependent pyridine nucleotide reductase signature 216 234 - -
Lele21g0654 585 PRINTS FAD-dependent pyridine nucleotide reductase signature 255 273 - -
Lele21g0654 585 PRINTS FAD-dependent pyridine nucleotide reductase signature 382 404 - -
Lele21g0654 585 PRINTS FAD-dependent pyridine nucleotide reductase signature 87 106 - -
Lele21g0654 585 PRINTS FAD-dependent pyridine nucleotide reductase signature 348 364 - -
Lele21g0654 585 Gene3D - 85 423 IPR036188 -
Lele21g0654 585 TIGRFAM lipoamide_DH: dihydrolipoyl dehydrogenase 85 554 IPR006258 GO:0004148|GO:0050660
Lele21g0654 585 SUPERFAMILY FAD/NAD-linked reductases, dimerisation (C-terminal) domain 435 553 IPR016156 GO:0016491|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0654 Lele-ChrLele21 4349586 4356075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0654 1 553 Acyl Lipid Metabolism Gene Families AT3G16950 83.333 0.0 910
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0654 21 4349586 4356075 Lele21g0654 21 4349586 4356075 ECH
Lele21g0654 21 4349586 4356075 Lele23g1382 23 18733691 18739022 hybridization
Lele21g0654 21 4349586 4356075 Lele24g0644 24 4303662 4308848 hybridization