Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0609 ATGGCAAAACACGAAGATCTTCCTGTTCCAATCTTCGATTCACTGGAGCCTGCGTATGGCGGAGGATCTCTTCTCGAAGAGGCCAAGCTTCGTTTTGACAATTTGAAGTCTAAGTTTCAGAAAGTTTTCGGTCATCCTCCTGAAGTCTTCGCCCGTTCACCTGGTAGAGTGAACTTAATCGGGGAACATATTGACTACGAGGGATATTCAGTTTTGCCGATGGCAATTCGGCAAGATACGATCGTGGCAATTCGGAAAAATGATGCCGACAATGTTCTTAGAATTGCTAATGTGAATGATGAAAAACATGCTATGTGTACTTATCCTGCTGATCCTTGCCAGGCACTAGACTTGAAGAATCACAAATGGGGGCATTATTTCATATGTGGGTACAAAGGTTATTACGACTATGCAAAATCAAAAGGAGTGGATGTTAGTAAAAAAGTTGGACTTGATGTTCTTGTTGATGGAATAGTTCCTCAAGGTTCTGGACTATCGAGCTCCGCAGCATTTGTCTGTTCCTCTACAATTGCCATTATGGCTGTCTTTGGAGTGAATTTCCCAAAGGTAAAACTTGATATCAGTTTTATGAAAGAAATTGCACAAGTTACTTGTGAATGTGAAAGGCATGTTGGAACACAATCTGGCGGGATGGATCAGGCAATCTCTGTCATGGCCAAGATTGGATTTGCTGAGCTTATTGATTTCAACCCCATTCGTGCTACAGATGTGCAGCTTCCTGCTGGTGGGACTTTTGTAATTGCCCATTCTTTAGCAGAGTCTCAAAAGGCTGTCACTGCTGCTACGAATTATAATAATAGGGTTGTTGAATGTCGTCTGGCTTCAATTGTGCTTGGCATAAAGCTGGGAATGAAGCCACAAGAGGCAATATCAAATGTGAAAACATTGTCTGATGTGGAAGGGTTATGTGTAACGTATGCTGGTAAACATAATTCATCTGATCCTGTCCTTGCTGTCAAGGAATTTTTGAAGGAAGAGCCATATACAGCTGAAGAGATTGAGAAAATTGCTGGGGAAAAGCTTACCTCAATTTTGAGCAGTAATGCAGCTTATTTGGATGTTCTAAAAGTTGCTAAGCACTACAAGTTACATCAGAGAGCTGCCCATGTGTACTCAGAGGCCAAGAGGGTGCATGCTTTCAAGGACATTGTCTCATCAAATTTAAGTGAGGATGAAACACTCAAAAAGCTTGGTGACCTTATGAACGAGAGCCATTATAGCTGCAGTGTATTATATGAATGCAGCTGTCCGGAATTGGAAGAACTTGTAAACGTCTGTCGCAAAAATGGCGCCCTTGGGGCGAGGCTTACTGGGGCCGGCTGGGGCGGTTGTACCGTCTCTCTGGTGAAAGAGAGCCTTGTCCCACAATATATCCTAAACTTGAAGGAACAATTTTTTCAGTCTAGGATTGACAAGGGGGTAATCGACAAGACCGAGCTTGGCCTTTATGTCTTTGCTTCCAAGCCTTCAAGTGGTGCTGCCATTTTCAAGGCCACGGAAAAGGATGTGCCAAGCTGGCAACTGTCGGCGAGGCATTTCATCAATACTTGGCTTCCTCGCAATTCCATAGTACCCAAAACAGCACGCCAGGCAGGCCATGTTATGGTTTTGGTTTTAAAATATGGCGTTTTGATTTTAAAGAATCAAAGTGATCTCTCTCCCTGGGAAACAAAGCAAGTTCAGTGCTTTCCCGATTCTGTTCATCCTGGGGATTCCATTTGA 1743 0.4332 MAKHEDLPVPIFDSLEPAYGGGSLLEEAKLRFDNLKSKFQKVFGHPPEVFARSPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRKNDADNVLRIANVNDEKHAMCTYPADPCQALDLKNHKWGHYFICGYKGYYDYAKSKGVDVSKKVGLDVLVDGIVPQGSGLSSSAAFVCSSTIAIMAVFGVNFPKVKLDISFMKEIAQVTCECERHVGTQSGGMDQAISVMAKIGFAELIDFNPIRATDVQLPAGGTFVIAHSLAESQKAVTAATNYNNRVVECRLASIVLGIKLGMKPQEAISNVKTLSDVEGLCVTYAGKHNSSDPVLAVKEFLKEEPYTAEEIEKIAGEKLTSILSSNAAYLDVLKVAKHYKLHQRAAHVYSEAKRVHAFKDIVSSNLSEDETLKKLGDLMNESHYSCSVLYECSCPELEELVNVCRKNGALGARLTGAGWGGCTVSLVKESLVPQYILNLKEQFFQSRIDKGVIDKTELGLYVFASKPSSGAAIFKATEKDVPSWQLSARHFINTWLPRNSIVPKTARQAGHVMVLVLKYGVLILKNQSDLSPWETKQVQCFPDSVHPGDSI 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0609 580 PANTHER MEVALONATE KINASE/GALACTOKINASE 7 501 - -
Lele24g0609 580 Pfam GHMP kinases C terminal 399 472 IPR013750 -
Lele24g0609 580 PRINTS Galactokinase signature 372 386 IPR000705 GO:0004335|GO:0005524|GO:0006012|GO:0046835
Lele24g0609 580 PRINTS Galactokinase signature 150 168 IPR000705 GO:0004335|GO:0005524|GO:0006012|GO:0046835
Lele24g0609 580 PRINTS Galactokinase signature 55 73 IPR000705 GO:0004335|GO:0005524|GO:0006012|GO:0046835
Lele24g0609 580 FunFam galactokinase-like isoform X1 37 244 - -
Lele24g0609 580 SUPERFAMILY GHMP Kinase, C-terminal domain 251 481 IPR036554 -
Lele24g0609 580 Pfam GHMP kinases N terminal domain 152 225 IPR006204 GO:0005524
Lele24g0609 580 ProSitePatterns GHMP kinases putative ATP-binding domain. 159 170 IPR006203 GO:0005524
Lele24g0609 580 SUPERFAMILY Ribosomal protein S5 domain 2-like 28 248 IPR020568 -
Lele24g0609 580 Gene3D - 245 474 - -
Lele24g0609 580 ProSitePatterns Galactokinase signature. 55 66 IPR019741 -
Lele24g0609 580 Pfam Galactokinase galactose-binding signature 38 86 IPR019539 -
Lele24g0609 580 Gene3D - 37 244 IPR014721 -
Lele24g0609 580 FunFam Galactokinase 270 420 - -
Lele24g0609 580 Gene3D - 270 420 - -
Lele24g0609 580 TIGRFAM gal_kin: galactokinase 34 474 IPR000705 GO:0004335|GO:0005524|GO:0006012|GO:0046835
Lele24g0609 580 PRINTS Mevalonate kinase family signature 53 77 - -
Lele24g0609 580 PRINTS Mevalonate kinase family signature 157 179 - -
Lele24g0609 580 PRINTS Mevalonate kinase family signature 440 457 - -
Lele24g0609 580 PRINTS Mevalonate kinase family signature 207 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0609 Lele-ChrLele24 4058858 4066410 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g0609 24 4058858 4066410 Lele24g0609 24 4058858 4066410 ECH
Lele21g0611 21 4090988 4095578 Lele24g0609 24 4058858 4066410 hybridization
Lele22g0611 22 4019220 4023724 Lele24g0609 24 4058858 4066410 hybridization