Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0611 ATGGCGAAACACGAAGATCTTCCTGTTCCAATCTTCGATTCACTGGAGCCTGCGTATGGCGGAGGATCTCTTCTCGAAGAGGCCAAGCTTCGTTTTGACAATTTGAAGTCTAAGTTTCAGAAAGTGTTCGGTCATCCTCCTGAAGTCTTCGCCCGTTCACCTGGTAGAGTGAACTTAATCGGGGAACATATTGACTACGAGGGATATTCAGTTTTGCCGATGGCAATTCGGCAAGATACGATCGTGGCAATTCGGAAAAATGATGCCGACAATGTTCTTAGAATTGCTAATGTGAATGATGAAAAACATAGTATGTGTACTTATCCTGCTGATCCTAACCAGGCACTCGACTTGAAGAATCACAAATGGGGGCATTATTTTATATGTGGGTACAAAGGTTATTACGACTATGCAAAATCAAAAGGAGTGGATGTTAGTAAAAAAGTTGGACTTGATGTTCTTGTTGATGGAATAGTTCCTCAAGGTTCTGGACTATCGAGCTCCGCAGCATTTGTCTGTTCCTCTACAATTGCCATTATGGCTGTCTTTGGAGTGAATTTCCCAAAGAAAGAAATTGCACAAGTTACATGTGAATGTGAAAGGCATGTTGGAACACAATCTGGCGGGATGGATCAGGCAATCTCTGTTATGGCCAAGATTGGATTTGCTGAGCTTATTGATTTCAACCCCATTCGTGCTACAGATGTGCAGCTTCCTGCTGGTGGGACTTTTGTAATTGCCCATTCTTTAGCAGAGTCTCAAAAGGCTGTCACTGCTGCTACGAATTATAATAACAGGGTTGTTGAATGTCGTCTGGCTTCAATTGTGCTTGGAATAAAGCTTGGAATGAAGCCACAAGAGGCAATATCAAATGTGAAAACATTGTCTGATGTGGAAGGGCTGTGTGTAACGTATGCTGGTAAACATAATTCATCTGATCCTGTCCTTGCTGTCAAGGAATTTTTAAAGGAAGAGCCATATACAGCTGAAGAGATTGAGAAAATTACTGGGGAAAAGCTTACCTTAATTTTGAGCAGTAATGCAGCTTATTTGGATGTTCTGAAAGTTGCTAAGCACTACAAGTTACATCAGAGAGCTGCCCATGTGTACTCAGAGGCCAAGAGGGTGCATGCTTTCAAGGACATTGTCTCATCAAATTTAAGTGAGGATGAAACACTCGAAAAGCTTGGTGACCTTATGAACGAGAGCCATTATAGCTGCAGTGTATTATATGAATGCAGCTGTCCGGAATTGGAAGAACTTGTAAACGTCTGTCGCAAAAATGGCGCCCTTGGGGCGAGGCTTACTGGGGCCGGATGGGGCGGTTGTACCGTCTCTCTGGTGAAAGAGAGCCTTGTCCCACAATATATCATAAACTTGAAGGAACAATTTTTCCAGTCTAGGATTGACAAGGGGGTAATCGGCAAGAATGAGCTTGGCCTTTATGTATTTGCTTCCAAGCCTTCAAGTGGTGCTGCCATTTTCAAGTTTTAA 1494 0.4284 MAKHEDLPVPIFDSLEPAYGGGSLLEEAKLRFDNLKSKFQKVFGHPPEVFARSPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRKNDADNVLRIANVNDEKHSMCTYPADPNQALDLKNHKWGHYFICGYKGYYDYAKSKGVDVSKKVGLDVLVDGIVPQGSGLSSSAAFVCSSTIAIMAVFGVNFPKKEIAQVTCECERHVGTQSGGMDQAISVMAKIGFAELIDFNPIRATDVQLPAGGTFVIAHSLAESQKAVTAATNYNNRVVECRLASIVLGIKLGMKPQEAISNVKTLSDVEGLCVTYAGKHNSSDPVLAVKEFLKEEPYTAEEIEKITGEKLTLILSSNAAYLDVLKVAKHYKLHQRAAHVYSEAKRVHAFKDIVSSNLSEDETLEKLGDLMNESHYSCSVLYECSCPELEELVNVCRKNGALGARLTGAGWGGCTVSLVKESLVPQYIINLKEQFFQSRIDKGVIGKNELGLYVFASKPSSGAAIFKF 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0611 497 SUPERFAMILY GHMP Kinase, C-terminal domain 243 472 IPR036554 -
Lele22g0611 497 SUPERFAMILY Ribosomal protein S5 domain 2-like 28 240 IPR020568 -
Lele22g0611 497 FunFam Galactokinase 262 412 - -
Lele22g0611 497 Gene3D - 37 236 IPR014721 -
Lele22g0611 497 PANTHER MEVALONATE KINASE/GALACTOKINASE 7 493 - -
Lele22g0611 497 Pfam GHMP kinases N terminal domain 152 217 IPR006204 GO:0005524
Lele22g0611 497 PRINTS Mevalonate kinase family signature 199 218 - -
Lele22g0611 497 PRINTS Mevalonate kinase family signature 432 449 - -
Lele22g0611 497 PRINTS Mevalonate kinase family signature 53 77 - -
Lele22g0611 497 PRINTS Mevalonate kinase family signature 157 179 - -
Lele22g0611 497 ProSitePatterns GHMP kinases putative ATP-binding domain. 159 170 IPR006203 GO:0005524
Lele22g0611 497 Gene3D - 237 466 - -
Lele22g0611 497 FunFam galactokinase-like isoform X1 37 236 - -
Lele22g0611 497 ProSitePatterns Galactokinase signature. 55 66 IPR019741 -
Lele22g0611 497 Pfam Galactokinase galactose-binding signature 38 86 IPR019539 -
Lele22g0611 497 Gene3D - 262 412 - -
Lele22g0611 497 PIRSF Galactokinase 24 497 IPR006206 GO:0005524|GO:0005737|GO:0016301|GO:0016773
Lele22g0611 497 TIGRFAM gal_kin: galactokinase 34 465 IPR000705 GO:0004335|GO:0005524|GO:0006012|GO:0046835
Lele22g0611 497 Pfam GHMP kinases C terminal 391 450 IPR013750 -
Lele22g0611 497 PRINTS Galactokinase signature 364 378 IPR000705 GO:0004335|GO:0005524|GO:0006012|GO:0046835
Lele22g0611 497 PRINTS Galactokinase signature 55 73 IPR000705 GO:0004335|GO:0005524|GO:0006012|GO:0046835
Lele22g0611 497 PRINTS Galactokinase signature 150 168 IPR000705 GO:0004335|GO:0005524|GO:0006012|GO:0046835
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0611 Lele-ChrLele22 4019220 4023724 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g0611 22 4019220 4023724 Lele22g0611 22 4019220 4023724 ECH
Lele22g0611 22 4019220 4023724 Lele23g1429 23 19000764 19010651 hybridization
Lele22g0611 22 4019220 4023724 Lele24g0609 24 4058858 4066410 hybridization