Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0596 ATGCACTGTTATATGACTGTTCAGCAGAGAAGAAAGGGAATAGGGGAAGGTTTGAAGAAAGTTTGTCCCACCTCTTGGCCTGGTGGTAATCCTGATATGCTGGAGGTTGCTACTTCTGCTCTTCCAATTGGTGTTTTCCAGCAGGCCATGCACTGGATGGCTATTGCACACGCAAAAGCATATGATCATATCCATGAACAAAGTGTCTCATTAAAACCCATAGTTGGTGTAGCACACCATGTGTCATTCATGCGACCCTATGGACTGTTTGATGTTGCTGCCGTTTCACTGGCAACTCCTGGACTATCTTCCCGTATATTGATAGAAGTTGTTTCTGGTGCGGGACTGAAACTTGTGGAAACAGATGAGTACAGTGAATCTGGTCATGGGGGTGTTCCTGTGCTAGGTTACCTGTTTTGGACTATTTCTGACACCTGGGAGTGGGCTGATGGATATGGTCCCAAGTTTGGACTTCTAGCAGTTGACCGAGCTAATAATCTTGCACGCAACCCACGCCCTTTTTACAACCTATTTTCTAAAGTTAGAACTGTTTCTATTGTTATTGTGGACATGGGTGGACTCGATGAACCTATTCAGCGACCTTATATTGAAAGAGATTGGCGGTATGGTCACTATGAGATGGATGGTCTACAAGATCCTTTGAGCCGCTTCTTAAGATTCATCATCCGGCCATTCTCCCTGAAAAGGAAAAGGAAACCTCAGAAGAAGAGTTCCACATCAGTTCTTCAGCCTCTTTAA 759 0.4466 MHCYMTVQQRRKGIGEGLKKVCPTSWPGGNPDMLEVATSALPIGVFQQAMHWMAIAHAKAYDHIHEQSVSLKPIVGVAHHVSFMRPYGLFDVAAVSLATPGLSSRILIEVVSGAGLKLVETDEYSESGHGGVPVLGYLFWTISDTWEWADGYGPKFGLLAVDRANNLARNPRPFYNLFSKVRTVSIVIVDMGGLDEPIQRPYIERDWRYGHYEMDGLQDPLSRFLRFIIRPFSLKRKRKPQKKSSTSVLQPL 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0596 252 Pfam Glycosyl hydrolase family 1 129 181 IPR001360 GO:0004553|GO:0005975
Lele24g0596 252 SUPERFAMILY (Trans)glycosidases 43 181 IPR017853 -
Lele24g0596 252 Gene3D Glycosidases 122 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0596 Lele-ChrLele24 4003173 4005318 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0596 131 229 Glycoside Hydrolase AT3G06510 48.855 9.42e-35 129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g0596 24 4003173 4005318 Lele24g0596 24 4003173 4005318 ECH
Lele21g0595 21 4021875 4024975 Lele24g0596 24 4003173 4005318 hybridization