Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g2003 ATGGATTTACCCCATCGTCCTCCACTCTCTTCCTGCTCCCTCCTCCTCTTTCTTCTCCTTATTCCTCATTTTGCTTCCTCTGATTTGGCCAAGGACCGGCAAGAGTGCGCCGAACAACTCGTCGGCCTCGCTCCCTGTCTCGCTTACGTCAACGGCGAGGCCAAAACTCCCACCATCGATTGCTGTACCGGTCTCAAACAGGTCATCGACAAGAGCAAGAAATGCCTCTGCCTCCTCATCAAATACCGCAACGAACCCGACCTCGGCGTCACCCTCAACGCCTCTCTCGCCGTCAACCTTCCCTCCGCCTGTCACGCCCCCGCCAACATCTCTCAGTGCATCGATCTTCTGCATCTGGCTCCTAATTCTTCCGAGGCGAAGGTGTACGAGGGCTTCGATAAAGCCTCTCACACTAACACTTCCAGTTCCACTTCTAGTTCCACCCCAGTCGCGCCTACTGGGAAGGGATCGAGCCCCAGCACGAGTGCTGATGAGAAGAACGGAGGCGTCTCTGTGTCTGTGTGGGAAAAAAGGCGGTTGGTGGCTCAAGTGGTTGGTGTGATTATGCCCTTTGTTTTCACCTTCCTTGTCTGA 594 0.5505 MDLPHRPPLSSCSLLLFLLLIPHFASSDLAKDRQECAEQLVGLAPCLAYVNGEAKTPTIDCCTGLKQVIDKSKKCLCLLIKYRNEPDLGVTLNASLAVNLPSACHAPANISQCIDLLHLAPNSSEAKVYEGFDKASHTNTSSSTSSSTPVAPTGKGSSPSTSADEKNGGVSVSVWEKRRLVAQVVGVIMPFVFTFLV 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g2003 197 MobiDBLite consensus disorder prediction 136 168 - -
Lele23g2003 197 FunFam Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 33 113 - -
Lele23g2003 197 PRINTS Plant phospholipid transfer protein signature 56 70 IPR000528 GO:0006869|GO:0008289
Lele23g2003 197 PRINTS Plant phospholipid transfer protein signature 35 51 IPR000528 GO:0006869|GO:0008289
Lele23g2003 197 PRINTS Plant phospholipid transfer protein signature 91 108 IPR000528 GO:0006869|GO:0008289
Lele23g2003 197 SMART aai_6 36 113 IPR016140 -
Lele23g2003 197 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 35 114 IPR036312 -
Lele23g2003 197 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 26 154 IPR043325 -
Lele23g2003 197 CDD AAI_LTSS 43 105 - -
Lele23g2003 197 Pfam Probable lipid transfer 30 113 IPR016140 -
Lele23g2003 197 Gene3D - 33 113 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g2003 Lele-ChrLele23 22815351 22816112 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g2003 15 197 Acyl Lipid Metabolism Gene Families AT2G44290 42.408 5.48e-49 156
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0052 21 359032 364438 Lele23g2003 23 22815351 22816112 hybridization
Lele22g0050 22 312111 312869 Lele23g2003 23 22815351 22816112 hybridization