Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1444 ATGAACATTACTGCTTCACGTGAAATGTACCAGAAAACGCTGGTGGAAGGTTGCCGTATTCCGCTCAGCCACTATGAAGTAGATATTACGGTTTCCAGGGAGTATGCGCGACTCCGGAGGCCAGACGACATGACGTTTGTTGCTCTCTTCGTTACCGCCACGAAGCTCGCCGGAGCAATTGTCACGATCACCATCGCCGCTAATGCCTTCTCATTCTCCCGTTTCAAGCGAAAGAATCTCCGCCCATTCCGCTCGCCTATTGACGAGTCCTCTGATGTACTCGCCGTCTTCAATGTTGATGAAGAGAAAAATGGATTTTTCTTTGGCCTGGCTACAGCACCAGCACATGTTGAGGATAGGCTCAATGATGCTTGGATTCAATTTGCAGAAGAAGATAAGCCTTGCGTTGACTCACATGAGGTCGAACAACAAGCTGATGCTTTAATGGGCTCTGCTGGTGATGGTGGGTCTCACCAAGCTGCTTCATCTCAACAACTTGATGATTACACATTCAAAAAGAGGAAAAAGACTTTAAAAGTTGCTATGGAGGCCATGATTAGAGGATTTGAGAAGTACTCAGAAGAAGATGAAGAAGAAGCACCAGCTGCTGTGCCAAAAGAAGAACACCAACATAATGTAACTGCTTGGCATAATGTTCCAAACCCGGAGGAGAGATTAAGGTTTTGGTCTGATCCTGATACAGAACTGAAGTTGGCCAAAGATACTGGTGTTACTGTCTTTCGCATGGGTATAGATTGGTCAAGAATAATGCCAAAGGAGCCTGTAAATGGGCTAAACGGATCTGTTAATTATGCCGCTTTGGAGCGTTATAAGTGGATTATCAATAGGGTTAAGTCATATGGAATGAAAGTCATGCTCACTCTTTTTCATCACTCACTACCACCTTGGGCTGGTGAGTATGGAGGTTGGAAGCTGGAAAAGACTGTTGATTATTTCATGGACTTTACCAGGCTTGTTGTAAACAGTGTATCTGATCTGGTTGAATATTGGGTTACTTTTAATGAACCTCATGTCTTCTGTATGCTTACTTATTGTGCTGGAGCTTGGCCTGGTGGTAATCCTGATATGCTGGAGGTTGCTACTTCGGCTCTTCCAACTGGTGTTTTCCAGCAGGCCATGCATTGGATGGCCATTGCACACTCAAAAGCATATGATTATGTCCATGAACAAAGTGTCTCATTAAAACCCATAGTCGGCGTAGCACACCATGTGTCATTCATGCGACCCTATGGATTGTTTGATGTTGCTGCTGTTTCACTGGCTAATTCCTTGACCATCTTCCCGTACATTGATAGTATTTCTGACAAGCTGGATTTTATAGGCATAAACTACTATGGGCAGGAAGTTGTTTCTGGTGCGGGACTGAAACTTGTGGAAACAGATGAGTACAGTGAATCTGGTCGTGGGGTATATCCTGATGGCTTGTATCGCATGTTGCTTCAGTTTCATGAAAGATACAAACATCTAAAAGTTCCCTTCATCATTACTGAAAACGGAGTATCTGATGAGACAGATCTAATCCGACGTCCCTATCTGTTGGAACATTTGCTTGCCGTATATGCAGCCATGATAAGGGGTGTTCCTGTGCTTGGTTACCTGTTTTGGACTATTTCTGATAACTGGGAGTGGGCTGATGGATATGGTCCCAAGTTTGGACTTGTAGCAGTTGACCGAGCTAATAATCTTGCACGCAACCCGCGCCCTTCTTACCACCTATTTTCTAAAATTGTGAACACGGGTAAAGTCACACGTGAGGATCGTGACAGAGAATGGAATGAACTACAGAGAGCTGCCATTGAGAAGAAAACAAGACCATTTTATCGGGCTGTAGACAAGCACGGTTTGATGTATGCAGGTGGACTCGATGAACCTATTCAGCGACCTTATATTGAAAGAGATTGGCGGTTTGGTCACTATGAGATGGATGGTCTACAAGATCCTTTGAGCCGCTTCTCAAGATTCATCATCCGGCCATTCTCCCTGAAAAGGAAAAGGAAACCTCAGAAGAAGAGTTCCACATTAGTTCTTCAACCTCTTGAAGCCATATGA 2070 0.4435 MNITASREMYQKTLVEGCRIPLSHYEVDITVSREYARLRRPDDMTFVALFVTATKLAGAIVTITIAANAFSFSRFKRKNLRPFRSPIDESSDVLAVFNVDEEKNGFFFGLATAPAHVEDRLNDAWIQFAEEDKPCVDSHEVEQQADALMGSAGDGGSHQAASSQQLDDYTFKKRKKTLKVAMEAMIRGFEKYSEEDEEEAPAAVPKEEHQHNVTAWHNVPNPEERLRFWSDPDTELKLAKDTGVTVFRMGIDWSRIMPKEPVNGLNGSVNYAALERYKWIINRVKSYGMKVMLTLFHHSLPPWAGEYGGWKLEKTVDYFMDFTRLVVNSVSDLVEYWVTFNEPHVFCMLTYCAGAWPGGNPDMLEVATSALPTGVFQQAMHWMAIAHSKAYDYVHEQSVSLKPIVGVAHHVSFMRPYGLFDVAAVSLANSLTIFPYIDSISDKLDFIGINYYGQEVVSGAGLKLVETDEYSESGRGVYPDGLYRMLLQFHERYKHLKVPFIITENGVSDETDLIRRPYLLEHLLAVYAAMIRGVPVLGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARNPRPSYHLFSKIVNTGKVTREDRDREWNELQRAAIEKKTRPFYRAVDKHGLMYAGGLDEPIQRPYIERDWRFGHYEMDGLQDPLSRFSRFIIRPFSLKRKRKPQKKSSTLVLQPLEAI 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1444 689 ProSitePatterns Glycosyl hydrolases family 1 active site. 500 508 IPR018120 -
Lele23g1444 689 Pfam Glycosyl hydrolase family 1 438 586 IPR001360 GO:0004553|GO:0005975
Lele23g1444 689 Pfam Glycosyl hydrolase family 1 233 418 IPR001360 GO:0004553|GO:0005975
Lele23g1444 689 Gene3D Glycosidases 187 598 - -
Lele23g1444 689 PRINTS Glycosyl hydrolase family 1 signature 557 569 IPR001360 GO:0004553|GO:0005975
Lele23g1444 689 PRINTS Glycosyl hydrolase family 1 signature 443 457 IPR001360 GO:0004553|GO:0005975
Lele23g1444 689 PRINTS Glycosyl hydrolase family 1 signature 512 523 IPR001360 GO:0004553|GO:0005975
Lele23g1444 689 PRINTS Glycosyl hydrolase family 1 signature 533 550 IPR001360 GO:0004553|GO:0005975
Lele23g1444 689 PRINTS Glycosyl hydrolase family 1 signature 500 508 IPR001360 GO:0004553|GO:0005975
Lele23g1444 689 SUPERFAMILY (Trans)glycosidases 208 592 IPR017853 -
Lele23g1444 689 PANTHER GLYCOSYL HYDROLASE 173 430 IPR001360 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1444 Lele-ChrLele23 19082483 19087063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1444 49 663 Glycoside Hydrolase AT3G06510 63.692 0.0 858
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g1444 23 19082483 19087063 Lele23g1444 23 19082483 19087063 ECH
Lele21g0595 21 4021875 4024975 Lele23g1444 23 19082483 19087063 hybridization