Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1410 ATGCTTGATTTTGACTTCCTTTGTGGTTTATACCAATTCTTTTCATCTTCTAGTTTGTTTCCTGTGGTATTCCTCTGGAGTAAGGAGACGCCATCAATTGCTGGAATCATTAATCCTGGTTCTGAGGGATTCCAGAAGCTCTTTTTTGGTCAAGATGAAATTGCAATCCCAGTGCATTCTACCATTGAAGCAGCTTGTGCTGCACATCCTACTGCTGAAGTCTACATCAATTTTGCATCATTTAGGAGTGCTGCTGCTTCATCCATTGCTCCATTGAAGCAGCCAACAATTAGAGATGTTGCTAGTATTGCTGAAGGGGTGCCTGAGTCTGACACAAAGCGTTTGATTGCATATGCCCGGTCAAACAATAAGGTTGTTATCGGCCCAGCCACCGTGGGAGGTATTCAAGCTGGTGCTTTTAAGATAGGTGACACGGCTGGAAAAATTGTAATTCAATGCAAGCTGTACAGGCCTGGATCTGTGGGCTTTGAATCTAAATCTATACTCAAATCGTGTAACTCTTATAGCATTGCGATTGGAGGAGATGTTTTTCCTGGTTCTACACTTTCTGATCATATATTGCGGTATAACAACATACCCCAGGTTCAAATGATGGTAGTACTTGTGGAGTTGGGTGGACGAGAAGAGTATTCTCTAGTGGAAGCCCTAAAACAAGGGAAAGTGACAAAAACAGGTGTAGCCTGGGGAGCTAAAAGTGGTAGTGAAATGGAGTCTGCTCAAGCGAAGAACCAAGCACTTAGAGAAGCTGGAGCTGTTGTTCTCACTTCATATGAAGCTTTTGAAGCTACAATTGAGGAAACATTTGACAAATTGGTAGAAGAAGGGGAAATCACGCCAGTGAAGGAGTTTACTCCTCCAGAGATTCCTGAGGACCTTAATACTGTAATTACGAGTGGAAAAGTGAGGAGCCATGCTATGCTGGTGTTCCCATGTCTAACATTATTGAAAAAGATATGCATCATGCTATGTGCCGACCATGGTCCTTCTATCTCTGGTGCTCACAATGCTATAGTGACAGCAAGGGCAGGGAAGGACCTTGTCTCCAGCATGGTATCAGCGCTAACATGGGGACTATGCTATGCCTTGTCAGAACCTTACGAATTTGTAGAAGGTATGAAGAAGAAGGGCATCCATGCGCCAGGAATAGGTCACAGAATCAAGAGTAGAGACAACACAGAAAAGAGAGTAGAGTTGCTACAGAATTTTGCAAACACCAATTTCCCTTCCGCAAAATACATGGAATATGCCGTTCAGGTTGAAAACTACACCCTTACAAAGGCAAATAACCTGGTTATCAACGTAGATGGTGCAATTGGGACCCTTTTCTTGGATCTTATTGCTGGCAGTGGGATGTTCACCAAGCAAGAGATCAATGAAATTGCGAAATTGGCTATCTGA 1419 0.432 MLDFDFLCGLYQFFSSSSLFPVVFLWSKETPSIAGIINPGSEGFQKLFFGQDEIAIPVHSTIEAACAAHPTAEVYINFASFRSAAASSIAPLKQPTIRDVASIAEGVPESDTKRLIAYARSNNKVVIGPATVGGIQAGAFKIGDTAGKIVIQCKLYRPGSVGFESKSILKSCNSYSIAIGGDVFPGSTLSDHILRYNNIPQVQMMVVLVELGGREEYSLVEALKQGKVTKTGVAWGAKSGSEMESAQAKNQALREAGAVVLTSYEAFEATIEETFDKLVEEGEITPVKEFTPPEIPEDLNTVITSGKVRSHAMLVFPCLTLLKKICIMLCADHGPSISGAHNAIVTARAGKDLVSSMVSALTWGLCYALSEPYEFVEGMKKKGIHAPGIGHRIKSRDNTEKRVELLQNFANTNFPSAKYMEYAVQVENYTLTKANNLVINVDGAIGTLFLDLIAGSGMFTKQEINEIAKLAI 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1410 472 Gene3D - 11 128 - -
Lele23g1410 472 Gene3D - 363 450 IPR016143 -
Lele23g1410 472 SUPERFAMILY Citrate synthase 175 460 IPR036969 GO:0046912
Lele23g1410 472 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 25 129 IPR036291 -
Lele23g1410 472 Pfam CoA-ligase 163 266 IPR005811 GO:0003824
Lele23g1410 472 Gene3D - 129 284 IPR016102 -
Lele23g1410 472 PANTHER ATP-CITRATE SYNTHASE 23 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1410 Lele-ChrLele23 18861112 18864753 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1410 1 471 Acyl Lipid Metabolism Gene Families AT3G06650 63.280 0.0 624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g1410 23 18861112 18864753 Lele23g1410 23 18861112 18864753 ECH
Lele22g0625 22 4143787 4148744 Lele23g1410 23 18861112 18864753 hybridization