Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0734 ATGGAAGCAAATTTATTATACCCTATTCACTTGGCTGCACGCCTCGGATCGTGTGGCGTTCTTCGATGTTTACATGATGCTGGTTGTAATTTGGACTCCCAAACACAATCTGGAGATACTGGATTAATGATCTCTACAAGGCATAAGCATGAGGATTGTTTTAAAGTGTTGGTTTCAGCTGGAGCTGATTTGGGGCTTGTAAATTCATCTGGTGAAACGGTGATGTCAATTGCGAAGTCTGGTAAGTGGACTAACATCTTCCAGAAAGCAATCTTGGAAGTGATTCGAGTCGGGAACGTTGTTAAATCGAGCAATGCCTCCGTGTTTTCGGCTTTAATTCTCGCGACTCGTGCTGATGATGTTGAGGATTTGAAGGAACTTGTTGGACATAGGAACATAAGTTTGGATGAGCAAGATGAAAATGGATTCTCAGCTGCCATGATAGCCGCAGCAGAAGGTAAAGCAGAGGCTTTCAGGTTGCTTCTTAAAGCTGGAGCTGATGTCCTAAAGCTAAGAAACAGGCACAATCTGACGGCCCTTGACCTTATAAACATAAACAAATCTTCAGGGAAAATTTTTGAGAAAATAATGCTTGAATTTGCACTTGAAAAGGGATCTAACGTCTTCAATCTTGCGATATTAAATCCTTTGCATCATGCTGCTCGCCATGGGGACACGAATCTGAACGAGATCACACACGAGACAACTCTGACACTTTCTCTAGGAAATGGTGCAGAGCGAGTAATATTCGACGAGCTAGCTCGAAGACTAGTTCTACGTGGGGATCGCGTGAAGAAGCACACGAAGCGTGGGAAAGCTACGATGGGGAAAATCAAAGAGAAGAAATGTGTCACTACCAAAAACAAAGAGTTCCATTTTATGTGTAGTGGTGGTGTTGAAATGGCTCAATTGTGGGTAAGGGGTATTAAATTGGCCACCAGAGAAGCCATCTTTGGTTAA 960 0.4302 MEANLLYPIHLAARLGSCGVLRCLHDAGCNLDSQTQSGDTGLMISTRHKHEDCFKVLVSAGADLGLVNSSGETVMSIAKSGKWTNIFQKAILEVIRVGNVVKSSNASVFSALILATRADDVEDLKELVGHRNISLDEQDENGFSAAMIAAAEGKAEAFRLLLKAGADVLKLRNRHNLTALDLININKSSGKIFEKIMLEFALEKGSNVFNLAILNPLHHAARHGDTNLNEITHETTLTLSLGNGAERVIFDELARRLVLRGDRVKKHTKRGKATMGKIKEKKCVTTKNKEFHFMCSGGVEMAQLWVRGIKLATREAIFG 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0734 319 PANTHER ANKYRIN REPEAT-CONTAINING 8 271 - -
Lele23g0734 319 SUPERFAMILY Ankyrin repeat 6 228 IPR036770 -
Lele23g0734 319 Gene3D - 3 87 IPR036770 -
Lele23g0734 319 ProSiteProfiles Ankyrin repeat profile. 37 69 IPR002110 GO:0005515
Lele23g0734 319 Gene3D - 88 251 IPR036770 -
Lele23g0734 319 ProSiteProfiles Ankyrin repeat region circular profile. 141 168 - -
Lele23g0734 319 ProSiteProfiles Ankyrin repeat profile. 141 173 IPR002110 GO:0005515
Lele23g0734 319 SMART ANK_2a 4 33 IPR002110 GO:0005515
Lele23g0734 319 SMART ANK_2a 141 170 IPR002110 GO:0005515
Lele23g0734 319 SMART ANK_2a 37 66 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0734 Lele-ChrLele23 5918068 5919262 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0734 10 181 Miscellaneous Gene Families AT1G07710 28.492 2.11e-06 47.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0734 23 5918068 5919262 Lele23g0734 23 5918068 5919262 ECH
Lele21g1298 21 21119355 21122892 Lele23g0734 23 5918068 5919262 hybridization