Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1298 ATGATGGTGCTGGTAAGCTCAGGCACAGGGATTAGAAACCAGGTTTTTCCGATCGATTACGAAACAGAGGTTTCGCAACGGCTCATCGACGCAGCTCATAATGGCAATACCGACGGCGCTCTGGAATGTATAGCCAATCCTTTTGTCGACGTCAACTTCATCGGAACGGTGAGCCTGAAATGCAGAACGACGGAGATTGTGTTGCACGACGAGTCGCCTCATGAAGTCCGATTCGGATACGAGGAGTTCAAGACGGAGGTCACTGCTCTGTTTCTTGCTGCTCATACAGGGAATTTGATCTTGCTCAGGAAGCTCCTGAATGTTGGAGGTAATGTGAATGAGAGATTGTTCCGGGGCTATTCCACGACGGCGGCGGTGAGGGAAGGGCACCGTCAAGTTCTGGAGATACTTATCGATGCCGGAGCGGATCAGCCGGCATGCGAGGAGGCGCTCATGGAGGCAAGCCTATTGGATCGGCCGAGATTTGCAGAGCTACTCATAGAGTCCAACATGATACGTCCTCATGTTGCTGTTCATGCCCTTGTCTCTGCCTCTTGCCGAGGATTCTCACAGCTTGTTCATGTCCTCCTCAAGCATGGGGTGGACGCGAATGCCATTGATAGGACATTGCTTCAATCTTCAAAGCCATTTCTGCACGCTAATGTTCATTGCAATGCATTGTTTGCTGCTGTTGTTAGCAGGCATATTGATGTTGTCAGATCGCTCTTGCAGGTAGGTATAAGGACAGATATTGAGGCCAAACTAGGGGCTTGGACATGGGAAATTGATACAGGAGAAGAATTTCGGGTCGGCGCAGGATTAGCCGATGCATACCCTATCACTTGGTGTGCTGTGGAATACTTTGAAGCAAGTGGAACTATACTGAGTATGCTTCTCCAACACCTCTCACCCAACACTTTACACTTTGGAAGAACCCTTCTCCACCATGCCATACTTTGTAACAACCAACAAGCTGTTAATCTGATCCTAAATTCCGGCGCAAATACAGAATTGGCAGTGAAATCAACTAAGGAAGCAAATTTATTATACCCTATTCACTTGGCTGCACGCCTCGGATTGTGTGGCGTTCTTCGATGTTTACATGATGCTGGTTGTAATTTGGACTCCCAAACACAATCTGGAGATACTGGATTAATGATCTCTACAAGGCATAAGGATGAGGATTGTTTTAAAGTGTTGGTTTCAGCTGGAGCTGATTTGGGGCTTGTAAATTCATCTGGTGAAACTGTGATGTCAATTGCGAAGTCTGGTAAGTGGACTAACATCTTCCAGAAAGCAATCTTGGACCTGATTCGAGGCGGGAACGTTGTTAAATCGAGCAATGCCTCCTTGTTTTCGGCTGTAATTCTCGCGACTGGTGCTGATGATGTTGAGGCTTTGAAGGAACTCATTGGACATAGGAACATAAATTTGGATGAGCAAGATGAAAATGGATTCTCAGCTGCCATGATAGCCGTAGCAGAAGGTAAAGCAGAGGCTTTCAGGTTGCTTCTTAAAGCTGGAGCTGATGTCCTAAAGCTAAGAAACAGGCACAATCTGACGGCCCTTGACCTTATAAACATAAACAAATCTGCAGGGAAAATTTTTGAGAAAATAATGCTTGAATTTGCACTTGAAAAGGGATCTAATGTCTTCAATCTTGCGATATTAAATCCTTTACATCATGCTGCTCGCCATGGGGACACGAATCTGGTTCATAAATTAATCAAGAAAGGATTTGATGTCAACACTTTCGACAACGAGGGATACACTCCATTAATGTTAGCAGCAAGAGAAAGCCAGAGTGAAATTTGTAAGCTTCTAATCTCAAGTGGAGCCAAATGTGATATTCAGAACGAGATCACACACGAGACAACTCTGACACTTTCTCGAGGAAATGGTGCAGAGCGAGTAATATTCGACGAGCTAGCTCGAAGATTAGTTCTACGTGGGGATCGCTTGAAGAAGCACACGAAGCGTGGGAAAGGTTTACCACACAGTAAAGAACTGAGAATGGTGGAGGGAATGGGAACGCTACGATGGGGAAAATCAAAGAGAAGAAATGTGGTATGTAAAGTTGCTGAGATTGGTGCAAGTGATAAATTCAGATGGAATCGTAGGAAAAAGTATGATGTTGAAGAGCCAGGACTGTTCCATGTAGTTACTACAAAAAACAAAGAGTTTCATTTTGTGTGTAGTGGTGGTGTTGAAATGGCTCAATTGTGGGTAAGGGGTATTAAATTGGCCACCAGAGAAGCCATCTTTGGTTAA 2271 0.45 MMVLVSSGTGIRNQVFPIDYETEVSQRLIDAAHNGNTDGALECIANPFVDVNFIGTVSLKCRTTEIVLHDESPHEVRFGYEEFKTEVTALFLAAHTGNLILLRKLLNVGGNVNERLFRGYSTTAAVREGHRQVLEILIDAGADQPACEEALMEASLLDRPRFAELLIESNMIRPHVAVHALVSASCRGFSQLVHVLLKHGVDANAIDRTLLQSSKPFLHANVHCNALFAAVVSRHIDVVRSLLQVGIRTDIEAKLGAWTWEIDTGEEFRVGAGLADAYPITWCAVEYFEASGTILSMLLQHLSPNTLHFGRTLLHHAILCNNQQAVNLILNSGANTELAVKSTKEANLLYPIHLAARLGLCGVLRCLHDAGCNLDSQTQSGDTGLMISTRHKDEDCFKVLVSAGADLGLVNSSGETVMSIAKSGKWTNIFQKAILDLIRGGNVVKSSNASLFSAVILATGADDVEALKELIGHRNINLDEQDENGFSAAMIAVAEGKAEAFRLLLKAGADVLKLRNRHNLTALDLININKSAGKIFEKIMLEFALEKGSNVFNLAILNPLHHAARHGDTNLVHKLIKKGFDVNTFDNEGYTPLMLAARESQSEICKLLISSGAKCDIQNEITHETTLTLSRGNGAERVIFDELARRLVLRGDRLKKHTKRGKGLPHSKELRMVEGMGTLRWGKSKRRNVVCKVAEIGASDKFRWNRRKKYDVEEPGLFHVVTTKNKEFHFVCSGGVEMAQLWVRGIKLATREAIFG 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1298 756 ProSiteProfiles Ankyrin repeat profile. 484 516 IPR002110 GO:0005515
Lele21g1298 756 Gene3D - 299 431 IPR036770 -
Lele21g1298 756 PANTHER ANKYRIN REPEAT-CONTAINING 22 743 - -
Lele21g1298 756 ProSiteProfiles Ankyrin repeat profile. 309 341 IPR002110 GO:0005515
Lele21g1298 756 ProSiteProfiles Ankyrin repeat region circular profile. 558 587 - -
Lele21g1298 756 ProSiteProfiles Ankyrin repeat region circular profile. 309 335 - -
Lele21g1298 756 SMART ANK_2a 117 146 IPR002110 GO:0005515
Lele21g1298 756 SMART ANK_2a 380 409 IPR002110 GO:0005515
Lele21g1298 756 SMART ANK_2a 222 253 IPR002110 GO:0005515
Lele21g1298 756 SMART ANK_2a 309 338 IPR002110 GO:0005515
Lele21g1298 756 SMART ANK_2a 347 376 IPR002110 GO:0005515
Lele21g1298 756 SMART ANK_2a 176 205 IPR002110 GO:0005515
Lele21g1298 756 SMART ANK_2a 450 478 IPR002110 GO:0005515
Lele21g1298 756 SMART ANK_2a 588 617 IPR002110 GO:0005515
Lele21g1298 756 SMART ANK_2a 484 513 IPR002110 GO:0005515
Lele21g1298 756 SMART ANK_2a 555 584 IPR002110 GO:0005515
Lele21g1298 756 SMART ANK_2a 85 114 IPR002110 GO:0005515
Lele21g1298 756 SUPERFAMILY Ankyrin repeat 310 630 IPR036770 -
Lele21g1298 756 ProSiteProfiles Ankyrin repeat profile. 380 412 IPR002110 GO:0005515
Lele21g1298 756 Gene3D - 175 259 IPR036770 -
Lele21g1298 756 Gene3D - 539 663 IPR036770 -
Lele21g1298 756 SUPERFAMILY Ankyrin repeat 28 256 IPR036770 -
Lele21g1298 756 Pfam Ankyrin repeats (3 copies) 545 619 IPR002110 GO:0005515
Lele21g1298 756 Gene3D - 432 538 IPR036770 -
Lele21g1298 756 Gene3D - 17 172 IPR036770 -
Lele21g1298 756 ProSiteProfiles Ankyrin repeat profile. 588 620 IPR002110 GO:0005515
Lele21g1298 756 ProSiteProfiles Ankyrin repeat region circular profile. 484 511 - -
Lele21g1298 756 ProSiteProfiles Ankyrin repeat profile. 558 587 IPR002110 GO:0005515
Lele21g1298 756 ProSiteProfiles Ankyrin repeat region circular profile. 588 620 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1298 Lele-ChrLele21 21119355 21122892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1298 448 611 Miscellaneous Gene Families AT1G07710 27.094 9.52e-07 50.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1298 21 21119355 21122892 Lele21g1298 21 21119355 21122892 ECH
Lele21g1298 21 21119355 21122892 Lele23g0734 23 5918068 5919262 hybridization