Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0733 ATGAAGCTACTTCCGAGAGAGGTCGAAAAGCTAACCCTGCATAATGCCGGTTTTCTTGCCCAGAAACGTCTTGCTCGTGGTTTAAGGCTTAATTATACTGAAGCTGTCGCTCTTATAGCTACACAGATTTTAGAATTCGTTCGTGATGGTGAAAAGACTGTTGCTGAACTAATGGACCTTGGGAAACGACTCTTGGGAAGGAGACAAGTTCTTCCAGCCGTTCCACATCTCTTGGATGCTGTTCAGGTTGAAGGCACATTTCCTGATGGGACTAAGTTAGTCACCATTCATGATGCAATTGCTTGTGAGAATGGTGACCTAGAACTGGCATTATATGGTTCTTTTCTTCCAGTACCTTCACTTGACAAGTTTCCCCCAATAGAAGATAATAGAATACCTGGTGAGATAATTAGTAGAGGTGGAAATCTGACTCTTAACTCTGGAAGGAAAGCAGTAGTTCTCAAAGTTGTCAACATTGGAGACAGGCCAATACAGGTTGGCAGCCACTATAACTTCATTGAAGTAAATCCGTACTTAGTCTTTGATCGAAGGAAAGCATATGGCATGCGTCTTAATATAGCAGCAGGGACTGCAATACGCTTTGAGCCAGGGGAAAGTAAATGCATTGCCCTTGTAAGCATCGGAGGTAACAAAGTCATCAGAGGTGGTAATGGCATTGCTGATGGACCAGTTAATGATTCCAATTTGGAAGCAGCCATGGAGGCTGTGAGAATAAGGAAATTCGGACATATGGAAGATGAAAATGCAAGTGAGGGTATAACAGGACAAGACTCTTCTTTCACTACAAGAATTTCTCGTGAGAAATATGCCAACATGTATGGCCCTGCTACTGGTGACAAAATCCGTCTTGGTGACACTGACTTGTTTGCTGAAATTGAAAAAGACTTTTCTGTCTGTGGTGATGAATGTGTTTTTGGAGTTGGGAAAGTTGTAAGAGATGGAATGGGTCAGTCATGCGGGCATCCATCTTCTTGCACCTTGGACACTGTAATTACAAATGCTGTGATCATTGATTACAGTGGAATTATCAAAGCGGATATTGGTATTAAAGATGGCCATATTGTATCAATTGGAAAAGCAGGAAATCCAGATCTCATGAATGATGTATCTCCTAATATGGTTATTGGGGCCTGTACTGAAGTTCTTGCTGGGGAAGGGTTAATTGTAACAGCTGGTGCCATAGACTGTCATGTGCATTTTATATGCCCTCAATTAGCATATGAGGCAATATCAAGCGGAATCACAACATTAGTGGGAGGTGGAACTGGACCAGCTGATGGAAAAAGGGCAACAACTTGCACACCAGCACCAATTCAGATGAAATTAATGCTGCAATCAACAGATCCCCTTCCACTGAACTTTGGTTTTACTGGCAAAGGAAATTGTTCCATGCCTAGTGAACTACATGAAATAATCAAGGCTGGAGCTATGGGACTGAAGTTGCATGAGGACTTGGGAAGTACCCCAGCTGCAATAGATAATTGTTTAACTGTTGCAGAACAGCATGACATCCAGGTTAATATACATACTGATACATTAAATGAATCTGGATTTGTGGAACATACAATCGCTTCATTTAAGGGAAGAACTATTCATACTTATCACAGTGAAGGTGCAGGTGGTGGCCATGCTCCAGATATAATAAGAGTATGTGGTGAGAAGAGTGTCCTGCCCTCGTCAACTAACCCTACACGACCTTTTACATCTAATACAATAGATGAACATTTTGACATGTTGATGATCAGCCATCACCTTGATAAGAACATTCCAGAAGATGTAGCTTTTGCAGAATCTAGGATAAGGGCTGAAACAATTGCTGCTGAAGATATTTTGCATGATATTGGAGCAATTAGCATTATATCTTCTGGTTCACAGGCTATGGGTCGAATTGGAGAGGTGATATGTAGAACTTGGCAGACTGCCAATAAGATGAAGGTGCAGAGAGGACCGCTTCAGCCTACTGATGATTCAGACAATGATAACTTTCGAATCAAACGATATGTTGCAAAATACACAATAAATCCAGCAATAGCAAACGGGTTCTCACAATTTATTGGTTCAGTTGAGGTGGGTAAGTTAGCTGATCTAGTGCTATGGAAACCATCATTTTTTGGTGCAAAACCAGAAATGGTTATCAAAGGCGGTGCAATTGCATGGGCTAACATGGGCGATCCAAATGCGAGCATCCCCATGCCTGAACCGGTGATGATGAGGCCTATGTTTGCTGCATTTGGCAAGGCTGCTACTAATCACTCCATTGCATTTGTGAGCAAGGCGGCACTAGAGGACGGAGTAAAAGCTTCTTACAGTCTAATCAAGAGGGTGGAAGCCGTGGCGAATGTGAGGAAGCTCACGAAACTAGACATGAAGCTCAACGACATGCTTCCTCGTATCACTGTTGACCCTGAAACTTACATTGTTACAGCTGATGACGAGGTTCTTACCTGCGATCCAGCCTCCTCTGTTCCCCTTTCTCTGAACTACTTCCTCTTTTAA 2517 0.4247 MKLLPREVEKLTLHNAGFLAQKRLARGLRLNYTEAVALIATQILEFVRDGEKTVAELMDLGKRLLGRRQVLPAVPHLLDAVQVEGTFPDGTKLVTIHDAIACENGDLELALYGSFLPVPSLDKFPPIEDNRIPGEIISRGGNLTLNSGRKAVVLKVVNIGDRPIQVGSHYNFIEVNPYLVFDRRKAYGMRLNIAAGTAIRFEPGESKCIALVSIGGNKVIRGGNGIADGPVNDSNLEAAMEAVRIRKFGHMEDENASEGITGQDSSFTTRISREKYANMYGPATGDKIRLGDTDLFAEIEKDFSVCGDECVFGVGKVVRDGMGQSCGHPSSCTLDTVITNAVIIDYSGIIKADIGIKDGHIVSIGKAGNPDLMNDVSPNMVIGACTEVLAGEGLIVTAGAIDCHVHFICPQLAYEAISSGITTLVGGGTGPADGKRATTCTPAPIQMKLMLQSTDPLPLNFGFTGKGNCSMPSELHEIIKAGAMGLKLHEDLGSTPAAIDNCLTVAEQHDIQVNIHTDTLNESGFVEHTIASFKGRTIHTYHSEGAGGGHAPDIIRVCGEKSVLPSSTNPTRPFTSNTIDEHFDMLMISHHLDKNIPEDVAFAESRIRAETIAAEDILHDIGAISIISSGSQAMGRIGEVICRTWQTANKMKVQRGPLQPTDDSDNDNFRIKRYVAKYTINPAIANGFSQFIGSVEVGKLADLVLWKPSFFGAKPEMVIKGGAIAWANMGDPNASIPMPEPVMMRPMFAAFGKAATNHSIAFVSKAALEDGVKASYSLIKRVEAVANVRKLTKLDMKLNDMLPRITVDPETYIVTADDEVLTCDPASSVPLSLNYFLF 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0733 838 Gene3D Urease, subunit C, domain 1 269 751 IPR011059 GO:0016810
Lele23g0733 838 Hamap Urease subunit alpha [ureC]. 269 838 IPR005848 GO:0006807|GO:0009039|GO:0016151
Lele23g0733 838 CDD Urease_gamma 5 100 IPR002026 GO:0016151|GO:0043419
Lele23g0733 838 TIGRFAM urease_gam: urease, gamma subunit 1 101 IPR002026 GO:0016151|GO:0043419
Lele23g0733 838 CDD Urease_beta 132 231 IPR002019 GO:0035550|GO:0043419
Lele23g0733 838 Gene3D - 4 124 IPR036463 GO:0016151|GO:0043419
Lele23g0733 838 TIGRFAM urease_alph: urease, alpha subunit 270 838 IPR005848 GO:0006807|GO:0009039|GO:0016151
Lele23g0733 838 Pfam Urease subunit beta-alpha linker domain 231 264 IPR040881 -
Lele23g0733 838 Pfam Urease alpha-subunit, N-terminal domain 270 388 IPR011612 -
Lele23g0733 838 PANTHER UREASE 1 838 - -
Lele23g0733 838 Gene3D Urease, beta subunit 149 268 IPR036461 -
Lele23g0733 838 PIRSF Urease 1 838 IPR008221 GO:0006807|GO:0009039|GO:0016151
Lele23g0733 838 SUPERFAMILY Metallo-dependent hydrolases 400 838 IPR032466 -
Lele23g0733 838 Pfam Amidohydrolase family 395 722 IPR006680 GO:0016787
Lele23g0733 838 FunFam Urease subunit alpha 4 124 - -
Lele23g0733 838 CDD Urease_alpha 270 837 IPR005848 GO:0006807|GO:0009039|GO:0016151
Lele23g0733 838 Gene3D - 399 819 - -
Lele23g0733 838 ProSitePatterns Urease nickel ligands signature. 397 410 IPR029754 GO:0016151
Lele23g0733 838 SUPERFAMILY Composite domain of metallo-dependent hydrolases 680 749 IPR011059 GO:0016810
Lele23g0733 838 TIGRFAM urease_beta: urease, beta subunit 132 232 IPR002019 GO:0035550|GO:0043419
Lele23g0733 838 SUPERFAMILY Urease, beta-subunit 132 260 IPR036461 -
Lele23g0733 838 ProSiteProfiles Urease domain profile. 399 838 IPR017951 GO:0006807|GO:0009039|GO:0016151
Lele23g0733 838 Pfam Urease, gamma subunit 1 100 IPR002026 GO:0016151|GO:0043419
Lele23g0733 838 FunFam Urease 149 267 - -
Lele23g0733 838 SUPERFAMILY Urease, gamma-subunit 1 104 IPR036463 GO:0016151|GO:0043419
Lele23g0733 838 SUPERFAMILY Composite domain of metallo-dependent hydrolases 270 447 IPR011059 GO:0016810
Lele23g0733 838 PRINTS Urea amidohydrolase (urease) protein signature 565 582 IPR005848 GO:0006807|GO:0009039|GO:0016151
Lele23g0733 838 PRINTS Urea amidohydrolase (urease) protein signature 604 620 IPR005848 GO:0006807|GO:0009039|GO:0016151
Lele23g0733 838 PRINTS Urea amidohydrolase (urease) protein signature 698 711 IPR005848 GO:0006807|GO:0009039|GO:0016151
Lele23g0733 838 PRINTS Urea amidohydrolase (urease) protein signature 672 687 IPR005848 GO:0006807|GO:0009039|GO:0016151
Lele23g0733 838 Pfam Urease beta subunit 133 229 IPR002019 GO:0035550|GO:0043419
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0733 Lele-ChrLele23 5896544 5913354 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0733 23 5896544 5913354 Lele23g0733 23 5896544 5913354 ECH
Lele21g1299 21 21125570 21143617 Lele23g0733 23 5896544 5913354 hybridization