Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0520 ATGGCGGGACATGACACTGAACTGAAGGCGGCGACGAAAGCATACCGGAATGCGAAGGCCGAGGCGAACAGGCAGGAGGAGGCCCGATGGGCGAACGTGATCGGAAACATAGTGAAGAATAGAGGAGAGTACGTTGAGGCCCTCAGCTGGTTTCGAAGAGATTATGAGATTTCTCTCAAATATTTGCCCGAGAAGCATTTGCTCCCTACCTGTCAATCTCTCGGGGAAATTTATCTGCGGCTTGAGCGTTTCAGCGAAGCTCTAACGTATCAGAAAAAACACTTGGAGCTCGCTAGGGATGCTAATGACCTTGTTGAGCAGCAAAGGGCCAGCACCCAACTCGGTCGTACTTATCATGAACTATTTTCAAGATCAGAACATGATCATCTCTCAATACGAAATGCAAAAAAGTATTTTAAGTCTGCTATGGAGCTAGCAAAGATTCTTAAGGAGGACCCACCAACTAATAAGTCTTCTTTTGTCAAAGAATATATTGATGCACACAACAATATGGGAATGCTGGAAATGGAACTTGATAACTTGGAAGAGGCTCGGAAAATCCTAACTAGAGGACTTGAGATTTGCAATGAAGAAGAGGTCAGCGAAGATGATGATGGGCGCAGCAGGCTCCATCATAACCTTGGAAATGTATATATGGAACTGAGAATGTGGGAAAAAGCTAGAAAACATATTGAGAAGGACATTCAAATTTGTAAAAGAATTGGACATTGTCAAGGAGAAGCAAAGGGCTACATTAATCTTGGGGAAGTGCATTACAGGACTCAGAAGTATGATGAAGCACGTTCTTATTATGAGAAGGCACTTACTCTGGCGAAATCCTTGGAAGATGAGGATGCATTGGTTAGGCAAATTGATGAAAATATCAGAACTTTAAATAAAGCTGCCAAAGTAATGGATGAATTAAAGAAAGAAGAGCAGAACTTCAAAAAGCTTAAAAGACATTTGGCTGCTGCAAGAGGCTCATCACATGAGCGTAAATATCTTCTGCAGCAAAATGCTTCCCTCGATCGCCTTCTTTGGAATTCAAGTATGATTTTTGCATGGGAGAAGCATTGTGAATTTGCAAAGGAGAAGAAGGAAATAGCAAGTGAATTGCGTGACAATGAAAAGCTCAGTGATTCATACCTGGCTCTTGGAGAATCATACCAGAAGCTCAGAAATTTCAATGAATCTATCAAATGGTACAGAAAGAGTTGGGATATGTACAAAACAATTGGTAACTTAGAGGGCCAAGCATTAGTGAAAATTGATATTGGCAATGTTTTGGATTCTGTTCACAATTGGAAAGGAGCACTAGATGCATTTGAAGAGAGCTACAGGATTGCTGTTCAAGCTAACCTTCCTTCTGTACAGCTTTCTGCCCTGGAAAATATGCACTATAGCAACATGATAAGATTTGATGATGAGAATGAAACTAGGAGGTTGAAACTAATAATTGATCAGCTGAAGAAATCAATAGATAAAGACCCTGAACCAAAAGATATACAAGAGGATTGCTGCTCTGAGACTGATACTGAAGCAGATGGTTATCTCTCAAATAGTGGGTCTGAATCAAACATGGCAACTGCTCGAGAAGATTGGAAAGATGACGTGCCCCTGATGTCAGTCTTTCAGTCCAGAAAAAAATCGTCCCAAAAAGCAGGTTCCATTGAAGGTTTTAGCAACTCTGTCGAGGAACCTCAGGAGTCATCTAGAAGTTTGCCAAAAACTACCAGTCAGAAGGCTGTTGGTTTTAAACGTGTCCGTGTGATCCTTTCTGATGATGATGAGGAGGAAGAGAATGTCAATGAGATGGAGCATTCAAGGAGAAAGCCCTGTGATTGTCAGTTAGAGGACTTCTCTACTTCTGATACAATAAAGAGTAAGAAAACGGGTGCCAGTCCTGCTGCTAAAATTCAGGTTGTCTCAGAGTATGGATCCAAATGTCCAATTAATGTTGAAGAATGCAGTAGTTCTTTCAAATGCCGGAATCCTCACAGTGCCACAAAAACTGCCAGCAGTGGTAGATCTCTTAGCAATGATATAATTGCCGAACCTGATGTTGCTAGTTGTTCAAAATGTGATACGAATGTCTCTGGCAAACTATTGCGCCATGGAGACGCCTATCCCATGAGGCGTAGTACTGAACAAGATCAAGATATTACAGTCAAGATTGAAAATGACCTGATTTACATAGAAGCAACCTCGTTTGTTGCTAGTGATCAGCTGAAGTCTGAAGTTGCATGCTTATATTATCTACAGCTTCCTAGAGAGAAAAGATCTGAGGGCTTGTTGCCCATTATTCAGCACATAAAATGTGCTGGAAGAGATCTAGAATCCCTAGAAACTGTTGAAAATCTTAAGGAATATCTGGGAGATGATATGGTCGAAGTTTCCGTTGATGGATGGGTTCAGAAGCGCTTAATAAAAATGTACATGGACTGCTGCGAGGAATTGTCCGAGGTGCCAAATCTCAAGGTACTCAAGAAACTATACAATTTAGAGGTTTCAGATGATGAGATTATTGTGACTGAGTGCGACCTGCAAGATTTGTCAGTAACTCCGTTGTTAAATGCACTGCTTTCTCACAAAAGATTTGCAATACTTGATCTCTCTCACAATATGTTAGGAAATGGAACAATGGAGAAACTTCAGAAAGTGTTCATGGCATCAGGCCAATCTTATGGCGGCCTGACTCTGGACTTGCATTGCAATCGGTTTGGTCCGACGGCATTGTTTCAGATATGTGAATGCTCAGTCCTATTTGCTCGACTTGAAGTGCTTAACTTTTCTGGAAACCGGCTTACTGATGCATGTGGATCTTATCTTTCAACTATCTTGGAAAAATGTACCGCCCTCTGTAGCTTGAACGTAGAGCGCTGTCATATCACATCTAGAACTATTCAAAAGATGGCCGATGCATTGGACTCTAAATCTGCACTTGCACAGCTTTGTATAGGTTATAACAACCCTGTATCCGGAAATGCTATTGTTAATCTACTGGCCAAGCTTTCTACTTTGAAAAGGTTTTCTGAGTTGAATCTGAGTGGTCTAAAATTGGGCAAACCTGTTGTTGATGCCCTTTGCCAGCTTGCTGGGACCATTACTTTATCAGGATTAATGCTTGGCAGCACGGGAATTGGAAATGAAGGGGCGATGCAATTAGCTCGATCATTGTTCAATGGGACACAAGAACTTGTGAAACTTGACCTATCATATTGCGGGCTTTCATCTAATAACTTTTTAAATGCAGGTGTTTCTTCATTTTGTTCCATTCTTGAGCTTAAACTGGAAGGAAATCCTATTATGCCAGAGGGCAGCTACACTCTATCTTCTCTGCTAATAAACCCACAGTGCTGTCTAAAAGTTTTAGTCCTTAGAAACTGTCAACTTGGGCTTACTGGAGTTCTCCACATAATTGAGGCACTAGCAGAGAACAACTGCCTACAGGAGCTTAATCTTGCAGGTAATGCTGCTCCAAATGAACTTTCTTCTCTAAGACATGACTTTTCAGTAAAAGGGTGCTCAGAAAACTTGGAGCAGAAGCTAGATACTTGTGAATTAAGTTCTCCCATGGAAGTGGACAGAACTAAAGAGCTTGAAGTTGCTAACAGTAAAGATGATCGGACGAGAGTAGCAGCTGCAGTTTCTGGAATTGATGACAGTTGTGCCAGTTCATGTCAAAGAAATTCTTCATCATCTCCCAAATGTCATTTAATTCGAAAACTTTCAACTGCTATTGGTCTGGCAAACAACCTGCAATTACTTGACCTTAGTGATAACGGTTTCTCTGCTGAAGCTGCAGAACTGTGGTATGGTTCATGGTCATCGTCGTCTTCACGAACTCGTTCGAGTCACAAGCACATTACTGATCAGACTATTCGTTTCTCAACCAGTGAAATTAAGTGCTGCCGAGTGAAGCCCTGCTGCAAGAAAGATTGA 3942 0.4143 MAGHDTELKAATKAYRNAKAEANRQEEARWANVIGNIVKNRGEYVEALSWFRRDYEISLKYLPEKHLLPTCQSLGEIYLRLERFSEALTYQKKHLELARDANDLVEQQRASTQLGRTYHELFSRSEHDHLSIRNAKKYFKSAMELAKILKEDPPTNKSSFVKEYIDAHNNMGMLEMELDNLEEARKILTRGLEICNEEEVSEDDDGRSRLHHNLGNVYMELRMWEKARKHIEKDIQICKRIGHCQGEAKGYINLGEVHYRTQKYDEARSYYEKALTLAKSLEDEDALVRQIDENIRTLNKAAKVMDELKKEEQNFKKLKRHLAAARGSSHERKYLLQQNASLDRLLWNSSMIFAWEKHCEFAKEKKEIASELRDNEKLSDSYLALGESYQKLRNFNESIKWYRKSWDMYKTIGNLEGQALVKIDIGNVLDSVHNWKGALDAFEESYRIAVQANLPSVQLSALENMHYSNMIRFDDENETRRLKLIIDQLKKSIDKDPEPKDIQEDCCSETDTEADGYLSNSGSESNMATAREDWKDDVPLMSVFQSRKKSSQKAGSIEGFSNSVEEPQESSRSLPKTTSQKAVGFKRVRVILSDDDEEEENVNEMEHSRRKPCDCQLEDFSTSDTIKSKKTGASPAAKIQVVSEYGSKCPINVEECSSSFKCRNPHSATKTASSGRSLSNDIIAEPDVASCSKCDTNVSGKLLRHGDAYPMRRSTEQDQDITVKIENDLIYIEATSFVASDQLKSEVACLYYLQLPREKRSEGLLPIIQHIKCAGRDLESLETVENLKEYLGDDMVEVSVDGWVQKRLIKMYMDCCEELSEVPNLKVLKKLYNLEVSDDEIIVTECDLQDLSVTPLLNALLSHKRFAILDLSHNMLGNGTMEKLQKVFMASGQSYGGLTLDLHCNRFGPTALFQICECSVLFARLEVLNFSGNRLTDACGSYLSTILEKCTALCSLNVERCHITSRTIQKMADALDSKSALAQLCIGYNNPVSGNAIVNLLAKLSTLKRFSELNLSGLKLGKPVVDALCQLAGTITLSGLMLGSTGIGNEGAMQLARSLFNGTQELVKLDLSYCGLSSNNFLNAGVSSFCSILELKLEGNPIMPEGSYTLSSLLINPQCCLKVLVLRNCQLGLTGVLHIIEALAENNCLQELNLAGNAAPNELSSLRHDFSVKGCSENLEQKLDTCELSSPMEVDRTKELEVANSKDDRTRVAAAVSGIDDSCASSCQRNSSSSPKCHLIRKLSTAIGLANNLQLLDLSDNGFSAEAAELWYGSWSSSSSRTRSSHKHITDQTIRFSTSEIKCCRVKPCCKKD 1313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0520 1313 Coils Coil 291 328 - -
Lele23g0520 1313 MobiDBLite consensus disorder prediction 545 580 - -
Lele23g0520 1313 Coils Coil 1 28 - -
Lele23g0520 1313 PANTHER PROTEIN TONSOKU 1 1313 IPR044227 GO:0005634|GO:0006325|GO:0009933|GO:0040029|GO:0072423
Lele23g0520 1313 Gene3D Tetratricopeptide repeat domain 3 330 IPR011990 GO:0005515
Lele23g0520 1313 ProSiteProfiles TPR repeat profile. 379 412 IPR019734 GO:0005515
Lele23g0520 1313 SMART LRR_RI_2 922 949 - -
Lele23g0520 1313 SMART LRR_RI_2 1034 1061 - -
Lele23g0520 1313 SMART LRR_RI_2 1089 1116 - -
Lele23g0520 1313 SMART LRR_RI_2 1118 1145 - -
Lele23g0520 1313 SMART LRR_RI_2 863 890 - -
Lele23g0520 1313 MobiDBLite consensus disorder prediction 513 528 - -
Lele23g0520 1313 SUPERFAMILY TPR-like 12 200 IPR011990 GO:0005515
Lele23g0520 1313 Pfam Tetratricopeptide repeat 380 405 IPR019734 GO:0005515
Lele23g0520 1313 FunFam Protein TONSOKU 3 157 - -
Lele23g0520 1313 Pfam Tetratricopeptide repeat 70 103 IPR019734 GO:0005515
Lele23g0520 1313 Pfam Tetratricopeptide repeat 208 280 - -
Lele23g0520 1313 SUPERFAMILY RNI-like 833 1267 - -
Lele23g0520 1313 SMART tpr_5 165 198 IPR019734 GO:0005515
Lele23g0520 1313 SMART tpr_5 208 241 IPR019734 GO:0005515
Lele23g0520 1313 SMART tpr_5 68 101 IPR019734 GO:0005515
Lele23g0520 1313 SMART tpr_5 379 412 IPR019734 GO:0005515
Lele23g0520 1313 SMART tpr_5 419 452 IPR019734 GO:0005515
Lele23g0520 1313 SMART tpr_5 28 61 IPR019734 GO:0005515
Lele23g0520 1313 SMART tpr_5 248 281 IPR019734 GO:0005515
Lele23g0520 1313 ProSiteProfiles TPR repeat region circular profile. 248 277 - -
Lele23g0520 1313 SUPERFAMILY TPR-like 362 464 IPR011990 GO:0005515
Lele23g0520 1313 Gene3D Tetratricopeptide repeat domain 352 498 IPR011990 GO:0005515
Lele23g0520 1313 SUPERFAMILY TPR-like 156 309 IPR011990 GO:0005515
Lele23g0520 1313 Coils Coil 164 198 - -
Lele23g0520 1313 Gene3D Ribonuclease Inhibitor 815 1190 IPR032675 -
Lele23g0520 1313 ProSiteProfiles TPR repeat profile. 248 281 IPR019734 GO:0005515
Lele23g0520 1313 FunFam Protein TONSOKU 815 1187 - -
Lele23g0520 1313 MobiDBLite consensus disorder prediction 495 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0520 Lele-ChrLele23 3843305 3852610 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1492 21 23211257 23220587 Lele23g0520 23 3843305 3852610 hybridization
Lele22g1481 22 20557948 20568141 Lele23g0520 23 3843305 3852610 hybridization