Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1492 ATGGCGGGACATGACACTGAACTGAAGGCGGCGACGACGGCATACCGGAATGCGAAGGCCGAGGCGAACAGGCAGGAGGAGGCCCGCTGGGCGAACGTGATCGGAAATATATTGAAGAATAGAGGAGAGTACGTTGAGGCCCTCAGCTGGTTTCGAAGAGATTATGAGATTTCTCTCAAATATTTGCCCGAGAAGCATTTGCTCCCTACCTGTCAATCTCTCGGGGAAATTTATCTTCGGCTTGAGCGTTTCAGTGAAGCTCTAACGTATCAGAAAAAACACTTGGAGCTCGCTAGGGATGCTAATGACCTTGTTGAGCAGCAAAGGGCCAGCACCCAACTCGGTCGTACTTATCTTGAACTATTTTCAAGATCAGAACATGATCATCTCTCAATACGAAATGCAAAAAAGTATTTTAAGTCTGCTATGGAGCTAGCAAAGATTCTTAAGGAGGACCCACCAACTAATAAGTCTTCCTTTGTCAAAGAATATATTGATGCACACAACAATATGGGAATGCTGGAAATGGAACTTGATAACTTGGAAGAGGCTCGGAAAATCCTAACTAGAGGACTTGAGATTTGCAATGAAGAAGAGGTCAGCGAAGATGATGATGGGCGCAGCAGGCTCCATCATAACCTTGGAAATGTATACATGGAAATGAGAATGTGGGAAAAAGCTAGAAAACATATTGAGAAGGACATTCAAATTTGTAAAAGAATTGGACATTGTCAAGGAGAAGCAAAGGGCTACATTAATCTTGGGGAAGTGCATTACAGGACTCAGAAGTATGATGAAGCACGTTCTTATTATGAGAAGGCACTTACTCTGGCGAAATCCTTGGAAGATGAGGATGCATTGGTTAGGCAAATTGATGAAAATATCAGAACTTTAAATAAAGCTGCCAAAGTAATGGATGAATTAAAGAAAGAAGAGCAGAACTTCAAAAAGCTTAAAAGACACTTGGCTGCTGCAAGAGGCTCATCACATGAGCGTAAATGTCTTCTGCAGCAAAATGCTTCGGTCGATCGCTTTCTTTGGAATTCAAGTATGATCTTTGCATGGGAGAAGCATTGTGAATTTGCAAAGGAGAAGAAGGAAATAGCAAGTGAATTGCGTGACAATGAAAAGCTCAGTGATTCATACCTGGCTCTTGGAGAATCATACCAGAAGCTCAGAAATTTCAACGAATCTATCAAATGGTACAGAAAGAGTTGGGATATGTACAAAACAATTGGTAACTTAGAGGGCCAAGCATTAGTGAAAATTGATATTGGCAATATTTTGGATTCTGTTCACAATTGGAAAGGAGCACTAGATGCATTTGAAGAGAGCTACAGGATTGCTGTTGAAGCTAACCTTCCTTCTGTACAGCTTTCTGCCCTGGAAAATATGCACTATAGCAACATGATAAGATTTGATGATGAGAATGAAACTAGGAGGTTGAAACTAATAATTGATCAGCTGAAGAAATCAATAGATAAAGACCCTGAACCAAAAGATATACAAGAGGATTGCTGCTCTGAGACTGATACTGAAGCAGATGGTTATCTCTCAAATAGTGGGTCTGACTCAAAAATGGCAACTGCTCGAGAAGATTGGAAAGATGACGTGCCCCTGATGTCAGTTTTCCAGTCCAGAAAAAAATGGTCCCAAAAAGCAGGTTCCATTGAAGGTTTTATCAACTCTGTCGAGGAACCTCAGGAGTCACCTAGAAGTTTGCCAAAATCTACCAGTCAGAAGGCTATTGGTTTTAAACGTGTCCGTGTAATCCTTTCTGATGATGAGGAGGAGGAAGAGAATGTCGATGAGATGGAGCATTCAAGGAGAAAGCCCCGTGATTGTCAGTTAGAGGACTTCTCTACTTCTGATACAATAAAGAGTAAGAAAAGCGATGCCAGTCCTGCTGCTAAAATTCAGGTTGTCTCAGAGTATGGATCCAAATGTCCAGTTAATGTTGAAGAATGCAGTAGTTCTTTCAAATGCCAGAATCCTCACAGTGCCACAAAAACTGCCAGCAGTGGTAGATCTCTTAGCAATGATATAATTGCCGAACCTGATGTTGCTAGTTGTTCAAAATGTGATACGAATGTCTCTGGCAAACTATTGCACCATGGAGTCGCCTATCCCATGAGGCGTAGTACTGAACGAGATCAAGATATTACAGTCAAGATTGAAAATGACCTGATTTACATAGAAGCAACCTCGTTTGTTGCTAGTGATCAGCTGAAGTCTGAAGTTGCATGCTTATATTATCTACAGCTTCCTAGAGAGAAAAGATCTGAGGGCTTGTTGCCCATTATTCAGCACATAAAATGTGCTGGGAGAGATCTAGAATCCCTAGATACTGTTGAAAATCTTAAGGAATATCTGGGAGATGATGTGGTCGAAGTTTCTGTTGATGGATGGGTTCAGAAGCGCTTAATAAAAATGTACATGGACTGCTGCGAGGAATTGTCCGAGGTACCAAATCTCAAGGTACTCAAGAAACTATACAATTTAGAGGTTTCAGATGATGAGATTATTGTGACCGAGTGCGACCTGCAAGATTTGTCAGTAACTCCGTTGTTAAATGCACTGCTTTCTCACAAAAGATTTGCAATGCTTGATCTCTCTCACAATATGTTAGGAAATGGAACAATGGAGAAACTTCAGAAAGTGTTCATGGCATCGGGCCAATCTTATGGCGGCCTGACTCTGGACTTGCATTGCAATCGGTTTGGTCCGACGGCATTGTTTCAGATATGTGAATGCTCAGTCCTATTTGCTCGACTTGAAGTGCTTAACTTTTCTGGAAACCGGCTTACTGATGCATGTGGATCTTATGTTTCAACTATCTTGGAAAAATGTACCGCCCTCTGTAGCTTGAACGTAGAGCGCTGTCATATCACATCAAGAACTATTCAAAAGATGGCCGATGCATTGGACTCTAAATCTGCACTTGCACAGCTTTGTATAGGTTATAACAACCCTGTATCCGGAAATGCTATTGTTAATCTACTGGCCAAGCTTTCTACTATGAAAAGGTTTTCTGAGTTGAATTTGAGTGGTCTCAAATTGGGCAAACCTGTTGTTGATGCCCTTTGCCAGCTTGCTGGGACCATTACTTTATCAGGATTAATGCTTGGCAGCACGGGAATTGGAAATGTGAGTGATATCTATGGTTACCGTGTATTCATAATATTGTTGATACCGCAATTGCTTGTTGTGCACTCATATCCCACTGGTTCTCTGATTCTGATAGATGTTCTTCCGCAGGAAGGGGCGATGCAATTAGCTCGATCATTGTTCAATGGGACACAAGAACTTGTGAAACTTGACCTATCATATTGCGGGCTTACATCTAATAACTTTTTAAATGCAGGTGTTTCTTCATTTTGTTCCATTCTTGAGCTTAAACTGGAAGAAAATCCTATTATGCCAGAGGGCAGCTGCACTCTATCTTCTCTGCTAATAAACCCACAGTGCTGTCTAAAAGTTTTAGTCCTTAGAAACTGTCAACTTGGGCTTACTGGAGTTCTCCACATAATTGAGGCACTAGCAGGGAACAACTGCCTACAGGAGCTTAATCTAGCAGGTAATGCTGCTCCAAATGAACTTTCTTCTCTAAGACATGACTTTTCAGTAAAAGGGTGCTCAGAAAACTTGGGGCAGAAGCTAGATACTTGTGAGTTAAGTTCTCCCATGGAAGTGGACAGGACTAAAGAGCTTGAAGTTGCTAACAGTCAAGATGATCGGACGAGAGTAGCAGCTGCAGTTTCTGGAATTGATGACAGTTGTGCCAGTTCATGTCAAAGAAATTCTTCATCATCTCCCAAATGTCATTTAATTCGAAAACTTTCAACTGCTATTGGTCTGGCAAACAACCTGCAATTACTTGACCTTAGTGATAACGGTTTCTCGGCTGAAGCTGCAGAACTGTGGTATGGTCTGTGGTCATCGTCCTCTTCGCGAACTCGTTCGAGTCACAAGCACATTACTGATCAGACTATTCATTTCTCAACCAGTGAAATTAAGTGCTGCAGAGTGAAGCCCTGCTGTAAGAAAGATTGA 4053 0.4165 MAGHDTELKAATTAYRNAKAEANRQEEARWANVIGNILKNRGEYVEALSWFRRDYEISLKYLPEKHLLPTCQSLGEIYLRLERFSEALTYQKKHLELARDANDLVEQQRASTQLGRTYLELFSRSEHDHLSIRNAKKYFKSAMELAKILKEDPPTNKSSFVKEYIDAHNNMGMLEMELDNLEEARKILTRGLEICNEEEVSEDDDGRSRLHHNLGNVYMEMRMWEKARKHIEKDIQICKRIGHCQGEAKGYINLGEVHYRTQKYDEARSYYEKALTLAKSLEDEDALVRQIDENIRTLNKAAKVMDELKKEEQNFKKLKRHLAAARGSSHERKCLLQQNASVDRFLWNSSMIFAWEKHCEFAKEKKEIASELRDNEKLSDSYLALGESYQKLRNFNESIKWYRKSWDMYKTIGNLEGQALVKIDIGNILDSVHNWKGALDAFEESYRIAVEANLPSVQLSALENMHYSNMIRFDDENETRRLKLIIDQLKKSIDKDPEPKDIQEDCCSETDTEADGYLSNSGSDSKMATAREDWKDDVPLMSVFQSRKKWSQKAGSIEGFINSVEEPQESPRSLPKSTSQKAIGFKRVRVILSDDEEEEENVDEMEHSRRKPRDCQLEDFSTSDTIKSKKSDASPAAKIQVVSEYGSKCPVNVEECSSSFKCQNPHSATKTASSGRSLSNDIIAEPDVASCSKCDTNVSGKLLHHGVAYPMRRSTERDQDITVKIENDLIYIEATSFVASDQLKSEVACLYYLQLPREKRSEGLLPIIQHIKCAGRDLESLDTVENLKEYLGDDVVEVSVDGWVQKRLIKMYMDCCEELSEVPNLKVLKKLYNLEVSDDEIIVTECDLQDLSVTPLLNALLSHKRFAMLDLSHNMLGNGTMEKLQKVFMASGQSYGGLTLDLHCNRFGPTALFQICECSVLFARLEVLNFSGNRLTDACGSYVSTILEKCTALCSLNVERCHITSRTIQKMADALDSKSALAQLCIGYNNPVSGNAIVNLLAKLSTMKRFSELNLSGLKLGKPVVDALCQLAGTITLSGLMLGSTGIGNVSDIYGYRVFIILLIPQLLVVHSYPTGSLILIDVLPQEGAMQLARSLFNGTQELVKLDLSYCGLTSNNFLNAGVSSFCSILELKLEENPIMPEGSCTLSSLLINPQCCLKVLVLRNCQLGLTGVLHIIEALAGNNCLQELNLAGNAAPNELSSLRHDFSVKGCSENLGQKLDTCELSSPMEVDRTKELEVANSQDDRTRVAAAVSGIDDSCASSCQRNSSSSPKCHLIRKLSTAIGLANNLQLLDLSDNGFSAEAAELWYGLWSSSSSRTRSSHKHITDQTIHFSTSEIKCCRVKPCCKKD 1350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1492 1350 SUPERFAMILY RNI-like 833 1304 - -
Lele21g1492 1350 SMART tpr_5 165 198 IPR019734 GO:0005515
Lele21g1492 1350 SMART tpr_5 419 452 IPR019734 GO:0005515
Lele21g1492 1350 SMART tpr_5 208 241 IPR019734 GO:0005515
Lele21g1492 1350 SMART tpr_5 68 101 IPR019734 GO:0005515
Lele21g1492 1350 SMART tpr_5 379 412 IPR019734 GO:0005515
Lele21g1492 1350 SMART tpr_5 28 61 IPR019734 GO:0005515
Lele21g1492 1350 SMART tpr_5 248 281 IPR019734 GO:0005515
Lele21g1492 1350 Coils Coil 291 328 - -
Lele21g1492 1350 Gene3D Tetratricopeptide repeat domain 160 338 IPR011990 GO:0005515
Lele21g1492 1350 PANTHER PROTEIN TONSOKU 1085 1350 IPR044227 GO:0005634|GO:0006325|GO:0009933|GO:0040029|GO:0072423
Lele21g1492 1350 ProSiteProfiles TPR repeat profile. 379 412 IPR019734 GO:0005515
Lele21g1492 1350 SUPERFAMILY TPR-like 362 464 IPR011990 GO:0005515
Lele21g1492 1350 Gene3D Ribonuclease Inhibitor 1083 1238 IPR032675 -
Lele21g1492 1350 SMART LRR_RI_2 922 949 - -
Lele21g1492 1350 SMART LRR_RI_2 1287 1313 - -
Lele21g1492 1350 SMART LRR_RI_2 1155 1182 - -
Lele21g1492 1350 SMART LRR_RI_2 863 890 - -
Lele21g1492 1350 SMART LRR_RI_2 1126 1153 - -
Lele21g1492 1350 Pfam Tetratricopeptide repeat 208 280 - -
Lele21g1492 1350 Pfam Tetratricopeptide repeat 28 99 - -
Lele21g1492 1350 Gene3D Tetratricopeptide repeat domain 349 496 IPR011990 GO:0005515
Lele21g1492 1350 SUPERFAMILY TPR-like 157 305 IPR011990 GO:0005515
Lele21g1492 1350 MobiDBLite consensus disorder prediction 596 631 - -
Lele21g1492 1350 ProSiteProfiles TPR repeat region circular profile. 248 277 - -
Lele21g1492 1350 Coils Coil 8 28 - -
Lele21g1492 1350 Gene3D Ribonuclease Inhibitor 759 1056 IPR032675 -
Lele21g1492 1350 SUPERFAMILY TPR-like 20 200 IPR011990 GO:0005515
Lele21g1492 1350 FunFam Protein TONSOKU 3 157 - -
Lele21g1492 1350 Gene3D Tetratricopeptide repeat domain 3 159 IPR011990 GO:0005515
Lele21g1492 1350 Coils Coil 164 198 - -
Lele21g1492 1350 Pfam Tetratricopeptide repeat 380 405 IPR019734 GO:0005515
Lele21g1492 1350 ProSiteProfiles TPR repeat profile. 248 281 IPR019734 GO:0005515
Lele21g1492 1350 MobiDBLite consensus disorder prediction 603 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1492 Lele-ChrLele21 23211257 23220587 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1492 21 23211257 23220587 Lele23g0520 23 3843305 3852610 hybridization
Lele21g1492 21 23211257 23220587 Lele24g1433 24 20273139 20277370 hybridization