Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0386 ATGAAGACACAGTTCGACATTATTTGCCCCTCTCCCTCCTCCGCGATTCAGGCAAAAAGAACCTGTGGAGGTAGAGATTCGGCAATGGAGGCAGAGAAAGTGAACAGAAGTCCGAAGAAACCACCCACATCTGAGTCGGAAGAAGATTCGACCTATACAACCACAAATGAGGAAGTAGAAGCAAAACCGGAGGTTTTAGACGGAGACGGTGCCGGAAACAGCACTCAAGCAGAGCTCACCAAGATCCCTCTCATGAGAGCTGTCGTTGAAGCCAAGGATCCTTCCGCTAAGGAAGCAGATGATTTGATGATAAGGAGATTCTTGCGTGCTCGTGATTTAGATATAGAGAAGGCTTCAACAATGTTTATCAAGTACTTGAAATGGAGACGATCACTTGTTCCAAATGGTTTCATATCTGAATCAGAGATTCCCAATGAGTTAGCCCACGAGAAGGTCTATATGCAAGGAGTCGATAAGATAGGACGACCTATAGTAGTTGCCTTTGGTGTAAAACATTATCAAAACCCAGACGGCCTCGATGAATTCAAACGACTAGTGACCTATATTCTTGATAAAGTGTGTTCAAGGATACCACAGGGACAAGAAAAGTTTGTAGCAGTAGGAGATCTTAAAGGTTGGAGATATGCAAACAGTGACGTTCGCGGATACATAGCTGCTCTTTCTATTTTGCAGGATTACTACCCAGAAAGATTGGGGAAGTTGTTTATAGTGCATGCGTCCACAATATTTATGACAGTTTGGAAGATGATATACCCCTTCATAGATAACAAAACCAAGAAGAAGATAATCTTTGTGGAGAAGAGTAAGATGAAATCAACACTGATGGAAGTAATAGACGAAAGTCAAATCCCAGAGATATATGGAGGCCAACTTCCCTTAGTTCCGATCCAGGATAGCTAA 921 0.4267 MKTQFDIICPSPSSAIQAKRTCGGRDSAMEAEKVNRSPKKPPTSESEEDSTYTTTNEEVEAKPEVLDGDGAGNSTQAELTKIPLMRAVVEAKDPSAKEADDLMIRRFLRARDLDIEKASTMFIKYLKWRRSLVPNGFISESEIPNELAHEKVYMQGVDKIGRPIVVAFGVKHYQNPDGLDEFKRLVTYILDKVCSRIPQGQEKFVAVGDLKGWRYANSDVRGYIAALSILQDYYPERLGKLFIVHASTIFMTVWKMIYPFIDNKTKKKIIFVEKSKMKSTLMEVIDESQIPEIYGGQLPLVPIQDS 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0386 306 MobiDBLite consensus disorder prediction 1 77 - -
Lele23g0386 306 SMART sec14_4 146 299 IPR001251 -
Lele23g0386 306 Pfam CRAL/TRIO domain 149 296 IPR001251 -
Lele23g0386 306 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 140 302 IPR001251 -
Lele23g0386 306 SMART CRAL_TRIO_N_2 100 125 IPR011074 -
Lele23g0386 306 PANTHER OS03G0850700 PROTEIN 73 305 - -
Lele23g0386 306 MobiDBLite consensus disorder prediction 25 46 - -
Lele23g0386 306 CDD SEC14 152 297 IPR001251 -
Lele23g0386 306 SUPERFAMILY CRAL/TRIO N-terminal domain 72 137 IPR036273 -
Lele23g0386 306 MobiDBLite consensus disorder prediction 1 20 - -
Lele23g0386 306 Gene3D - 27 305 IPR036865 -
Lele23g0386 306 SUPERFAMILY CRAL/TRIO domain 141 299 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0386 Lele-ChrLele23 2799494 2803174 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0386 106 293 Acyl Lipid Metabolism Gene Families AT5G47730 26.829 2.25e-14 70.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0386 23 2799494 2803174 Lele23g0386 23 2799494 2803174 ECH
Lele21g1625 21 24212816 24215142 Lele23g0386 23 2799494 2803174 hybridization