Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1625 ATGGAGGCAGAGAAAGTGAACAAAACTCCGAAGAAACCATCCACATCTGAGTCCGAAGAAGATTCGACCTATACAACCACAAATGAGGAAGCAGAAGCAAAAACGGAGGTTTTGGATGGAGACGGTGCCGGAAACAGCACTCAAGCAGAGCTCACCAAGATCCCTCTCATGAGAGCTGTCGTTGAAGCCAAGGATCCTTCCGCTAAGGAAGCAGATGATTTGATGATAAGGAGATTCTTGCGTGCTCGTGATTTAGATATAGAGAAGGCTTCAGCAATGTTTATCAAGTACTTGAAATGGAGACGATCATTTGTTCCAAATGGTTTCATATCTGAATCAGAGATTCCCAATGAGTTGGCCCACGAGAAGGTCTACATGCAAGGAGTCGATAATATAGGACGACCTATAGTAGTTGCCTTTGGTGCAAAACATTATCAAAACCCAGACGACCTCGATGAATTCAAACGATTAGTGACCTATATTCTTGATAAAGTGTGTTCAAGGATACCACAGGGACAAGAAAAGTTTGTAGCAGTAGGAGATCTTAAAGGTTGGAGATATGCAAACAGTGACATTCGTGGATACTTAGCTGCTCTTTCTATTTTGCAGGATTACTACCCAGAAAGATTGGGGAAGTTGTTTATACTGCATGCGTCCACCATATTTATGACAGTTTGGAAGATGATATACCCCTTCATAGATAACAAAACCAAGAAGAAGATAATCTTTGTGGAGAAGAGTAAGATCAAATCAACACTGATGGAAGTAATAGACGAAAGTCAAATCCCAGAGATATATGGAGGCCAACTTCCATTAGTTCCAATCCAGGATAGCTAA 837 0.4134 MEAEKVNKTPKKPSTSESEEDSTYTTTNEEAEAKTEVLDGDGAGNSTQAELTKIPLMRAVVEAKDPSAKEADDLMIRRFLRARDLDIEKASAMFIKYLKWRRSFVPNGFISESEIPNELAHEKVYMQGVDNIGRPIVVAFGAKHYQNPDDLDEFKRLVTYILDKVCSRIPQGQEKFVAVGDLKGWRYANSDIRGYLAALSILQDYYPERLGKLFILHASTIFMTVWKMIYPFIDNKTKKKIIFVEKSKIKSTLMEVIDESQIPEIYGGQLPLVPIQDS 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1625 278 Gene3D - 2 277 IPR036865 -
Lele21g1625 278 MobiDBLite consensus disorder prediction 1 49 - -
Lele21g1625 278 Pfam CRAL/TRIO domain 121 268 IPR001251 -
Lele21g1625 278 SUPERFAMILY CRAL/TRIO N-terminal domain 44 110 IPR036273 -
Lele21g1625 278 MobiDBLite consensus disorder prediction 1 18 - -
Lele21g1625 278 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 112 274 IPR001251 -
Lele21g1625 278 CDD SEC14 124 269 IPR001251 -
Lele21g1625 278 SUPERFAMILY CRAL/TRIO domain 113 271 IPR036865 -
Lele21g1625 278 PANTHER OS03G0850700 PROTEIN 45 277 - -
Lele21g1625 278 SMART CRAL_TRIO_N_2 72 97 IPR011074 -
Lele21g1625 278 SMART sec14_4 118 271 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1625 Lele-ChrLele21 24212816 24215142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1625 78 265 Acyl Lipid Metabolism Gene Families AT5G47730 24.390 2.05e-12 64.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1625 21 24212816 24215142 Lele21g1625 21 24212816 24215142 ECH
Lele21g1625 21 24212816 24215142 Lele23g0386 23 2799494 2803174 hybridization