Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0332 ATGGAGGCCATCGGAGAGAGTCCACGAAGCCCAGAGGCGAAACTTGGGATGCGAGTGGAGGATCTGTGGGACGTTCAGGAGCCACAGCTAAGTCCCACCGAGAAGCTCAACGCTTGCTTCGAAAGCATCCCTGTGTCTGCTTTCCCTTCAGCTCCTTCAAGTCAGGTGGTGGAGATAAAATCAGACGCCACCCTACCGGAAGCTGTTGAAACGCTAGCACACCACAATATCCTGAGCGCACCGGTGGTGGATGTTAAAGCACCTAAAGATGCTACTTGGATTGACAGATATATCGGAATTGTTGAGTTTGCCGGAATTGTTGTATGGGTCTTGCAACAGTCTGAGCCTCCATCTCCTAAGAGTCCCAGCAGTGGAGGTGCTAATGGGTTCAGTTATCATCTAGAACTTGGGAGCTTAGGATTTGGATCTGCTGCAACAACTTCTGGCAACTATTTTGAGGATTTAACTTCTTCTGAATTTTATAAGAATACCAAGGTTTGTGATATTTCAGGGTCATTCCGCTGGGCCCCATTTCTTGCATTGCAAAGATCAAACTCATTTCTTACCATGCTCTTGCTACTTTCCAAGTATAATATGAAGAGTATTCCAGTGGTAGATCTGGGTGCAGAAAAAATTGATAATGTTATCACACAGTCTGGTGTTATTCATATGTTGGCAGAGTGCGTGGGGCTTCAGTGGTTCGAGAGTTGGGGAACCAAGAAACTATCTGAAGTTGGTCTTCCTGTGATGACACCTGATTGTATCATTAAGGTTTATGAGGATGAACCAGTGCTTCAGGCATTTAGATTGATGAGGAAAAAGAGGATTGGAGGGTTACCCGTAATAGAAAGAGGAAGCAACAAGGCTGTGGGTAACATAAGCCTACAAGATGTTCAATTCTTGCTAACTGCTCCAGAAATTTACCACGATTATAGAGCTATTACTGTAAAACACTTCCTGACGGCAGTTAGAAGCTACTTGGAGAAGCACAAAGAGGTCTTCCCAATGTTAGGCACCTTGGTTACATGCCAAAAGGATTGCACGATCAAAGAATTGATTCAATTGCTTGACCATGAGAAGAGTCATCGGATATATGTTGTAACTGATGATGGTGATCTAGAAGGAGTGATCACACTCAGAGATATCATCTCAAGGCTAGTGGACGAGCCCAAAGGCTATTTTGGTGATTTCTTTGATGGTGTTCTTCCTTTGCCTCCCGACAGCCGGGTTTAA 1233 0.4469 MEAIGESPRSPEAKLGMRVEDLWDVQEPQLSPTEKLNACFESIPVSAFPSAPSSQVVEIKSDATLPEAVETLAHHNILSAPVVDVKAPKDATWIDRYIGIVEFAGIVVWVLQQSEPPSPKSPSSGGANGFSYHLELGSLGFGSAATTSGNYFEDLTSSEFYKNTKVCDISGSFRWAPFLALQRSNSFLTMLLLLSKYNMKSIPVVDLGAEKIDNVITQSGVIHMLAECVGLQWFESWGTKKLSEVGLPVMTPDCIIKVYEDEPVLQAFRLMRKKRIGGLPVIERGSNKAVGNISLQDVQFLLTAPEIYHDYRAITVKHFLTAVRSYLEKHKEVFPMLGTLVTCQKDCTIKELIQLLDHEKSHRIYVVTDDGDLEGVITLRDIISRLVDEPKGYFGDFFDGVLPLPPDSRV 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0332 410 Pfam CBS domain 249 298 IPR000644 -
Lele23g0332 410 Pfam CBS domain 340 387 IPR000644 -
Lele23g0332 410 SUPERFAMILY CBS-domain pair 28 226 IPR046342 -
Lele23g0332 410 Gene3D - 48 232 IPR046342 -
Lele23g0332 410 ProSiteProfiles CBS domain profile. 250 311 IPR000644 -
Lele23g0332 410 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 37 386 - -
Lele23g0332 410 ProSiteProfiles CBS domain profile. 52 118 IPR000644 -
Lele23g0332 410 SUPERFAMILY CBS-domain pair 251 396 IPR046342 -
Lele23g0332 410 Gene3D - 239 389 IPR046342 -
Lele23g0332 410 CDD CBS_pair_SF 191 298 - -
Lele23g0332 410 ProSiteProfiles CBS domain profile. 336 392 IPR000644 -
Lele23g0332 410 SMART cbs_1 339 387 IPR000644 -
Lele23g0332 410 SMART cbs_1 177 226 IPR000644 -
Lele23g0332 410 SMART cbs_1 55 111 IPR000644 -
Lele23g0332 410 SMART cbs_1 254 303 IPR000644 -
Lele23g0332 410 CDD CBS_pair_SF 255 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0332 Lele-ChrLele23 2322504 2324982 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0332 23 2322504 2324982 Lele23g0332 23 2322504 2324982 ECH
Lele21g1679 21 24755098 24757551 Lele23g0332 23 2322504 2324982 hybridization
Lele22g1657 22 22104135 22115280 Lele23g0332 23 2322504 2324982 hybridization