Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0171 ATGGAGAAGCTAGAAACTTATGGGTCATTGATCAGGCAAAGACCCATTCAGATTCTGGTCATATTTGGATTGCTGTATATAATGTTGGTCACGCTGGAAATCCCCCTTGTGTTCAAATCCAGGTTTAGTGCTGTCTCTCATGATTTCTTGACTAGTCATCCTAGGCTGGAGAGCGAGGAGGACTTTGAGAAAATAAAAGCCCCAACTCTCCCTCTTGAAGAAGTTTCTCAAAATGCTGATCAAAGCACTCAAAGACAACTGAATAAGCGCAAGATTATATCTGGCTTGATCTTCAATAATGATACATTTCGTTTGTGGGGTAGGGATGGGTCGTCCGAGCTTTACGAGTCAGCAAAGAATGCTTGGATTCTGGGGAAGAAGATTTGGGAAGAGTTGGAAACGTTGAACTTGAGGACCGTCTCTGAAAAGTCCGAGCACCAATCAGAGTCATGCTCACCATCCATTTCTCTATCTGGGTCAGTGTTTCTAGTTCGAGGGCTAGTTATGGTTCTTCCTTGTGGACTGACATTGGGGTCCCACATAACAGTGGTAGGAAAGCCGCAGGTTGTCAACCTAGGTGCAGTTCGTCGGGCGGCAGCATCGCAGTTTGTTATGCAGTTGCAAGGGTTGAAGATTGTGGATGGGGAGGATGCCCCAAGAATTTTGCATTATAATCCCAGATTGAAGGGAAATTGGAGTCGGAAGCCTGTAATTGAGCAAAACACTAGTTACAGAATGCATTGGGTTGATGGACTGGTGAAATGTGAGAAGTGGATTCGGGGTGATGACAGTCATGCAGTGGTGTCTAAGGCAACATGGTGGTTAAACAGACTTATAGGTCGAACGAGAAGAGTAACGGTTGACTGGCCCTTCCCATTTGTTGATGGCAAGCTATTTGTTCTTACTCTTAGTGCTGGAATGGAGGGCTTTCATGTTGATGTTGATGGGAGACATGTGACCTCTTTCCCTCATCGCACTGGTTTCACTCTTGAGGATGCCACTGGTCTTTCTTTAGGTGGGGAAACTGATGTCCATGCTATATTTGCTACTCCTCTGCCTTCAGTTCATCCAAGTTTTTCTCCACAGAAGCATCTGGCCTTCTCAAGAAGATGGCGTGCCCCGCCACTTCCCGGCTTTGATGTAGAAATGTTCATCGGAGTCCTTTCTGCTGGAAACCATTTTGCTGAGAGGATGGCTATAATGAAGTCATGGATGCGGCACAATCTCATCCAATCTTCAAGAGTGGTGACTCGATTCTTTGTAGCAGAAGTAACAATGACCAACATATTTTCAAGGTTATAA 1302 0.4524 MEKLETYGSLIRQRPIQILVIFGLLYIMLVTLEIPLVFKSRFSAVSHDFLTSHPRLESEEDFEKIKAPTLPLEEVSQNADQSTQRQLNKRKIISGLIFNNDTFRLWGRDGSSELYESAKNAWILGKKIWEELETLNLRTVSEKSEHQSESCSPSISLSGSVFLVRGLVMVLPCGLTLGSHITVVGKPQVVNLGAVRRAAASQFVMQLQGLKIVDGEDAPRILHYNPRLKGNWSRKPVIEQNTSYRMHWVDGLVKCEKWIRGDDSHAVVSKATWWLNRLIGRTRRVTVDWPFPFVDGKLFVLTLSAGMEGFHVDVDGRHVTSFPHRTGFTLEDATGLSLGGETDVHAIFATPLPSVHPSFSPQKHLAFSRRWRAPPLPGFDVEMFIGVLSAGNHFAERMAIMKSWMRHNLIQSSRVVTRFFVAEVTMTNIFSRL 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0171 433 CDD GLECT 171 348 IPR001079 GO:0030246
Lele23g0171 433 Pfam Galactoside-binding lectin 168 348 IPR001079 GO:0030246
Lele23g0171 433 FunFam Hydroxyproline O-galactosyltransferase GALT2 264 348 - -
Lele23g0171 433 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 167 350 IPR001079 GO:0030246
Lele23g0171 433 Gene3D - 165 347 - -
Lele23g0171 433 SMART Gal_bind_lectin_2 171 349 IPR001079 GO:0030246
Lele23g0171 433 PANTHER GALECTIN 169 347 IPR044156 -
Lele23g0171 433 SUPERFAMILY Concanavalin A-like lectins/glucanases 168 348 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0171 Lele-ChrLele23 1083784 1085359 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0171 1 422 Glycosyltransferase AT1G74800 52.539 1.02e-161 469
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0171 23 1083784 1085359 Lele24g1770 24 22873486 22885137 ECH
Lele23g0171 23 1083784 1085359 Lele23g0171 23 1083784 1085359 ECH
Lele21g1841 21 25924229 25926173 Lele23g0171 23 1083784 1085359 hybridization
Lele22g1814 22 23236675 23239415 Lele23g0171 23 1083784 1085359 hybridization