Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1841 ATGCATCAACAACGTTTCAGTCCTCTCATCATTGACGTCAAGAATCTGATGTTTAGTGCTGTCTCTCATGATTTCTTGACTAGTCATACTAGGCTGGAGAGCGAGGAGGACTTTGAGACAGTAAAAGCCCCAACTCTCCCTCTTGAAGAAGTTTCTGAAAATGCTGATCAAAGCACTCACAGACAACTGAATGAGAGCAAGATTATATCTGGCTTGATCTTCAATAATGATACGTTTCATTTGTTGGGTAGGGATGGGTCGTCCGAGCTTTACGAGTCAGCAAAGAATGCTTGGATTCTGGGGAAGAAGATTTGGGAAGAGTTGGAAACGTTGAACTTGAGGACCGTCTCTGAAAAGTCCGAGCACCAATCAGAGTCATGCCCACCATCCATTTCTCTATCTGGGTCAGTGTTTCTACTTCGAGGGCTAGTTATGGTTCTTCCTTGTGGACTGACATTGGGGTCCCACATAACAGCGGTAGGAAAGCCGCAGGTTGTCAACCTAGGTGCAGTTCGTCGTGCGGCAGCATCGCAGTTTGTTATGGAGTTGCAAGGGTTGAAGATTGTGGATGGGGAGGATCCCCCAAGAATTGTGCATTATAATCCCAGATTGAAGGGAGATTGGAGTCGGAAGCCTGTAATTGAGCAAAACACTCGTTACAGAATGCATTGGGTTGATGGACTGGTGAAATGTGAGAAGTGGATTCGGGGTGATGACAGTCATGCAGTGGTGTCTAAGGCAACATGGGGGTTGAACAGACTTATAGCAACGAGAAAAGTAACGGTTGACTGGCCCTTCCTATTTGTTGACGGCAAGCTATTTGTTCTTACTCTGAGTGCTGGAATGGAGGGCTTTGCTGGAATGGAGGGCTTTCAAGTTGATGTTGATGGGAGACATGTGACCTCGTTCCCTTGTCGCACTGTTTTCACTCTTGAGGATGCCACAGGTCTTTCTTTAGGTGGGGACATTGACGTCCATGCTATATTTGCTACCTCTCTGCCTTCAGTTCATCCAAGTTTTTCTCCACAGAAGCATCTGGACTTCTTAAGAAGATGGCGTGCCCCACCACTTCCCGGCTTTGATGTAGAAATGTTCATCGGAGTCCTTTCTGCTGGAAACCATTTTGCTGAGAGGATGGCTATAAGGAAGTCATGGATGCAGCACAATCTCATCCAATCTTCAAGAGTGGTGACTCGATTCTTTGTAGCAGCAGTTGTTAGAAAATAA 1227 0.4613 MHQQRFSPLIIDVKNLMFSAVSHDFLTSHTRLESEEDFETVKAPTLPLEEVSENADQSTHRQLNESKIISGLIFNNDTFHLLGRDGSSELYESAKNAWILGKKIWEELETLNLRTVSEKSEHQSESCPPSISLSGSVFLLRGLVMVLPCGLTLGSHITAVGKPQVVNLGAVRRAAASQFVMELQGLKIVDGEDPPRIVHYNPRLKGDWSRKPVIEQNTRYRMHWVDGLVKCEKWIRGDDSHAVVSKATWGLNRLIATRKVTVDWPFLFVDGKLFVLTLSAGMEGFAGMEGFQVDVDGRHVTSFPCRTVFTLEDATGLSLGGDIDVHAIFATSLPSVHPSFSPQKHLDFLRRWRAPPLPGFDVEMFIGVLSAGNHFAERMAIRKSWMQHNLIQSSRVVTRFFVAAVVRK 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1841 408 SMART Gal_bind_lectin_2 147 330 IPR001079 GO:0030246
Lele21g1841 408 SUPERFAMILY Concanavalin A-like lectins/glucanases 144 330 IPR013320 -
Lele21g1841 408 Pfam Galactoside-binding lectin 144 329 IPR001079 GO:0030246
Lele21g1841 408 Gene3D - 142 329 - -
Lele21g1841 408 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 143 331 IPR001079 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1841 Lele-ChrLele21 25924229 25926173 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1841 8 408 Glycosyltransferase AT1G74800 53.009 4.96e-143 421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1841 21 25924229 25926173 Lele22g1814 22 23236675 23239415 ECH
Lele21g1841 21 25924229 25926173 Lele21g1841 21 25924229 25926173 ECH
Lele21g1841 21 25924229 25926173 Lele23g0171 23 1083784 1085359 hybridization
Lele21g1841 21 25924229 25926173 Lele24g1770 24 22873486 22885137 hybridization