Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0012 ATGTTGCTCGCATTCCCATATTATTTTACATGGCAACTCTTCAGCTTGATCAATTACGCGACATTTTTAGCCGCTCGACATGGATCCCGACGGCAGCCTCACCATCCTCGAGCTCGCTGCCCTTCTTCGCCCCCCCGGCCTCAAGCCCTCCGGCGATCAAACCACGTTTTGCTCGCCGCCCTTGACTCCAATGGCAACGGCTCCGTCGAATTCGACGAGTTGCTCTCTGCCATTCTCCCCGACATGAACGAGCAGGTCTTGTTGACCCAAGGCCAACTTCTCGAGGTTTTCAAAAGCTTCGACCGCGATGGCAAAGCCTACATATCGGACATGGAGTTAGCCGGAGCCATGGCCAAAATGGGTCAGACATTGTCCTATCGAGAGCTCTCTCCGAGATGA 399 0.5439 MLLAFPYYFTWQLFSLINYATFLAARHGSRRQPHHPRARCPSSPPRPQALRRSNHVLLAALDSNGNGSVEFDELLSAILPDMNEQVLLTQGQLLEVFKSFDRDGKAYISDMELAGAMAKMGQTLSYRELSPR 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0012 132 ProSitePatterns EF-hand calcium-binding domain. 62 74 IPR018247 -
Lele23g0012 132 SMART efh_1 92 120 IPR002048 GO:0005509
Lele23g0012 132 SMART efh_1 53 81 IPR002048 GO:0005509
Lele23g0012 132 Gene3D - 40 130 - -
Lele23g0012 132 SUPERFAMILY EF-hand 54 130 IPR011992 -
Lele23g0012 132 ProSiteProfiles EF-hand calcium-binding domain profile. 88 123 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0012 Lele-ChrLele23 75141 75539 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0012 55 130 EF-hand Containing Proteins AT1G18530 71.053 5.14e-35 117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0012 23 75141 75539 Lele24g1917 24 23839778 23840875 ECH
Lele23g0012 23 75141 75539 Lele23g0012 23 75141 75539 ECH