Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0009 ATGGCTCGAACAAGCACGGTCCCTGACCCTGAGAGAGGAGCCTGCCCCCACCCCGATAGTGAAATATCAAACGCATTTGTCTCCTCACCATTCTCTTTCGCTCCATCAATTCCTTCTCCCCAAAACATTCAACCACAAACCAAGAATCCTCTCTCTCTCTCTCTCGGCCATTTTTTCAGTGTTATATTCTGTTCTTTTCATTCCCTCTCTGGGATGAACACTCACATGGCTACACCCTCTCAAGACTTCTCCAAGAGAAACTCCCACTCCTCCAAGCTCCTCGGAAACGAAGACGCTGATGACGAAGCTCCCCCTCCCACGTCCCAGTCCATCTCTCAACTCCTCCATAACCATCACCAAAAGCCTCCAGCTCCAGCCACCGGCCGGAAGCTGCAGGCCCTTGCCGTTTCTAGGCTCCGATCTGTTCTCGCCGCCTTCCATAAGAACCGTTCCAATCCACCTTTCGCTCTCGGCCCTCGAATCGTCGGCACTCTCTTCGGGAATCGACGAGGTCACGTGCATCTCGCCTTCCAGAAGGACCCCACCTCGCGACCTGCCTTCCTAATTGAGCTCGCTACGCCCATCAGTGGCTTGGTTCGCGAAATGGCATCTGGCTTGGTTCGAATCACTCTAGAATGCGACAAATCGAAGGAGGTAGAGAAGAAACCTCTGAGGTTACTGGAAGAACCTGTGTGGAAGACGTATTGCAACGGGAAGAAGTGTGGTTTTGCTTCCAAAAGAGACTGTGGAGACAGAGAGTGGGAAATTTTGAAAGCTGTGGAGCCAATCTCAATGGGTGCTGGGGTTCTGCCCGGTGGGAAAAATGAAGCTGAGTCCGAATCTGATGGTGAGCTCATGTACATGAGAGCTAAGTTTGAGAGGGTCGTTGGTTCTAGAGACTCTGAAGCTTTTTACATGATGAATCCTGACTGTAACGGAGTTCCCGAACTCAGTGTTTATTTGCTCAGAGTCTGA 975 0.5128 MARTSTVPDPERGACPHPDSEISNAFVSSPFSFAPSIPSPQNIQPQTKNPLSLSLGHFFSVIFCSFHSLSGMNTHMATPSQDFSKRNSHSSKLLGNEDADDEAPPPTSQSISQLLHNHHQKPPAPATGRKLQALAVSRLRSVLAAFHKNRSNPPFALGPRIVGTLFGNRRGHVHLAFQKDPTSRPAFLIELATPISGLVREMASGLVRITLECDKSKEVEKKPLRLLEEPVWKTYCNGKKCGFASKRDCGDREWEILKAVEPISMGAGVLPGGKNEAESESDGELMYMRAKFERVVGSRDSEAFYMMNPDCNGVPELSVYLLRV 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0009 324 TIGRFAM A_thal_3588: uncharacterized plant-specific domain TIGR01570 161 324 IPR006460 GO:0010274
Lele23g0009 324 PANTHER PROTEIN MIZU-KUSSEI 1 107 324 IPR006460 GO:0010274
Lele23g0009 324 MobiDBLite consensus disorder prediction 77 110 - -
Lele23g0009 324 MobiDBLite consensus disorder prediction 1 20 - -
Lele23g0009 324 Pfam Protein of unknown function, DUF617 161 323 IPR006460 GO:0010274
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0009 Lele-ChrLele23 59584 60558 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0009 23 59584 60558 Lele24g1920 24 23863796 23864556 ECH
Lele23g0009 23 59584 60558 Lele23g0009 23 59584 60558 ECH
Lele21g2003 21 26911812 26912573 Lele23g0009 23 59584 60558 hybridization
Lele22g1969 22 24286960 24287721 Lele23g0009 23 59584 60558 hybridization