Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1969 ATGAACACTCACATGGCTACTGCCTCTCAAGACTTCTCCAAGAGACACTGTCACTCCTCTAAGCTCCTCGGAAACGAAGACGCTGATGACGAAGCTCCCCCTCCCACTTCCCAGTCCATCTCCCAAATCCTCCATAACCATCCCCAAAAGCCTCTAGCTCCACCCACCGGCCGGAAGCTGCAGGCCCTTGCCGTTTCTAGGCTCCGATCTGTTCTCGCCGCCTTCCATAAGCACCGTTCTAATCCACCTTTCACTCTCGGCCCTCGAGTCGTCGGCACTCTCTTCGGGAATCGACGTGGTCACGTGCATCTCGCCTTCCAGAAGGACCCCACCTCGCGACCTGCCTTCCTAATCGAACTCGCCACGCCAATCAGTGGCTTGGTTCGCGAAATGGCGTCTGGCTTGGTTCGAATCACTCTAGAATGCGACAAATTGAAGGAGGTAGAGAAGAAACCTCTGAGGTTACTGGAAGAACCTGTGTGGAAGACGTATTGCAACGGGAAGAAGTGTGGTTTTGCTTCCAAAAGAGACTCTGGAGACAGAGAGTGGGAAATTTTGAAGGCTGTGGAGCCAATCTCAATGGGTGCTGGGGTTCTGCCTTGTGGGAACAATGAAACTGGGTCTAAATCTGATGGTGAACTCATGTACATGAGAGCTAAGTTTGAGAGGGTCGTTGGTTCCAGAGACTCTGAAGCTTTTTACATGATGAATCCTGACTGTAACGGAGTTCCCGAACTCTCTGTTTATTTGCTTAGAGTCTGA 762 0.5157 MNTHMATASQDFSKRHCHSSKLLGNEDADDEAPPPTSQSISQILHNHPQKPLAPPTGRKLQALAVSRLRSVLAAFHKHRSNPPFTLGPRVVGTLFGNRRGHVHLAFQKDPTSRPAFLIELATPISGLVREMASGLVRITLECDKLKEVEKKPLRLLEEPVWKTYCNGKKCGFASKRDSGDREWEILKAVEPISMGAGVLPCGNNETGSKSDGELMYMRAKFERVVGSRDSEAFYMMNPDCNGVPELSVYLLRV 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1969 253 TIGRFAM A_thal_3588: uncharacterized plant-specific domain TIGR01570 90 253 IPR006460 GO:0010274
Lele22g1969 253 Pfam Protein of unknown function, DUF617 90 252 IPR006460 GO:0010274
Lele22g1969 253 MobiDBLite consensus disorder prediction 23 56 - -
Lele22g1969 253 MobiDBLite consensus disorder prediction 32 46 - -
Lele22g1969 253 PANTHER PROTEIN MIZU-KUSSEI 1 39 253 IPR006460 GO:0010274
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1969 Lele-ChrLele22 24286960 24287721 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g2003 21 26911812 26912573 Lele22g1969 22 24286960 24287721 ECH
Lele22g1969 22 24286960 24287721 Lele22g1969 22 24286960 24287721 ECH
Lele22g1969 22 24286960 24287721 Lele23g0009 23 59584 60558 hybridization
Lele22g1969 22 24286960 24287721 Lele24g1920 24 23863796 23864556 hybridization