Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0007 ATGAATTTTGGGGTGAGTAAATTCCTTCCTACTGTTACTTTTGTCTTCCTTTTTCGTATATTCTCTACTCAATTTGAACCAGAGTCTTGCTCTACTTTAGCTCGCCTCTGTTGCCCACGTCTGACAGCGGGTGGTAATCGCATGGACTGGCGTGTAAACAGCCAGTATAGAAGTTACAAAGTAGATGATCATAAATCAACGATGGAGGTTGCGCTTATTCCAAACGTGGACCCCGTAAATCTTGGCCTTGGCTCTTCAGAAAAGGCAAATCCCATAAATTCAGTGAAGCCAAGAAAGAAAACAATGACATCAGTTTATCTTAAGTTCTTTGAGACAGCTGCTGATGGGAAGACCCGGAGATGCAAGTTTTGTGGACAAACATATTCTATTGCAACTGCCACAGGCAATTTGGGAAGGCATCTTGCCAATCGCCATCCAGGGTATGAAAAGTCAGGGGATGCTGTCAGCAATCCAGCAACTCAACATATTGCTGTGGCCAAGAAGACTCAACCTCAAGGAAAAGCAAACCAGGTCGATTATGATAATCTAAATTGGTTGCTCATTAGGTGGCTTGTTACAGCTTCTCTGCCCCTGTCAACTCTGGAGGAGAAGTGGCTAGCGAATTCCTTCAAGTTTCTAAACTCATCTATACAAATCTGGCCAAGTGAGAAGTATAGATCTGTGCTTTTTGAAGTTTTCAGAAGCATGAAGGAAGAATTGAAAGCGTTTTTAGCGCAAGTTTCTTCCAAGTTCTCCATCACAGTTGATTTCTGGACTTCTTTTGAACAGATCTTTTATATGAGTGTCACTTGTCAGTGGATTGATGAAAACTGGTGCTTCCAGAAAGTGCTTCTTGATATTTGTCACATACCTTCCCCTTATGGGAGTACAGAAATATATCAGTCCCTCATTAAAGTTCTTAAAATGTTCAATATTGAAAATAGAGTCCTCTCATGTACCCATGATAATAGTCAAAGTGCAATGCATGCCTGCCATACTTTGAAAGAGGACTTAGATGCTCAGAAGATAGGGCCATTCTGTTATCTTCCCTGTGCTGCTAGAACTTTGAGCTTGATTATAGATGATGGTTTGAGATCCACAAAGTCAATAATATCTAAGATCCGGGAGTTTGTAATAGAATTGAATGCCTCATCAGAGATGGCTGAGGATTTTATTCAAATGTCTACGGCTTATCAAGAAGGTACTTGGAAATTTCCACTTGATTTTTCCACAAGATGGAGTGGAAATTACCAGATGCTTGACATTGTTCGCAAGGGAGGTAAATCTATGGATGCAGTTATTCGTAAATACGAGGAGACTCTTGGTAGTAGGATGGTGCTGAACTCAACTGAAAAAAGTGTGGCTGGTGTCGTGCATCAGTATTTGGAGCCATTCTACAAGACCACGAATAACCTATGCACAAGTAAGGTGCCAACAGTTGGCCTCGTCCTTTTCTTTATGGATCACATCTCAGAAACAATTGCTAACTGCAGAGAATCCCGTCACAGCCCAGACTGGCTAAAAAGCGCTTCAGAAGAAATGGCTAAAAAGGCCAGAAGTTACATTAGTCAGGTTTGCAACATATTCACATACATGACAGCAATTCTAGACCCTCGAATTAAGGGAGAGCTAATCCCCGAGGGTTTAAACTCGGATAGTTTTCTAGAGGAAGCAAGAACCCATTTTACAAGAAATTATTCTACTACTCATTTCTCATCCATGAGTGCTGGATACAGTGCTCAGGAAATTGAAGATGGAGCTGTTTCCTTTGCTGAGGAGATAGCACGCAAGAAACGACGTGCAAGCATGAGCTCTGGCACTGATGAGCTTAGTCAGTATCTTTCAGAGGCGCCCGCTCCAATACCCACTGATGTTCTGGAATGGTGGAAGGTCAATAGTACACGCTATCCACGGTTATCTGTGATGGCTAGAGATTTCCTGGCTATGCAGGCAACTTCAGTTGTGCCTGAAGAACTTTTCTGTGGCAGGGGTGATGAGATCAACAAGCAACGGTTCTGTATGTCACATGATAGCACACAATCTATTCTTTGTATCAAGTCATGGTTTCAGGTAGGCATCAAGTTCAAGTTTAAGTCAACTGAAATTGATTACGAGAGGTTAATGGACATGGTAGCTGCTGGTGCAATCGATAGTAGCAATACTGCTTCAGACAAGAAGCAAAAATGA 2187 0.4198 MNFGVSKFLPTVTFVFLFRIFSTQFEPESCSTLARLCCPRLTAGGNRMDWRVNSQYRSYKVDDHKSTMEVALIPNVDPVNLGLGSSEKANPINSVKPRKKTMTSVYLKFFETAADGKTRRCKFCGQTYSIATATGNLGRHLANRHPGYEKSGDAVSNPATQHIAVAKKTQPQGKANQVDYDNLNWLLIRWLVTASLPLSTLEEKWLANSFKFLNSSIQIWPSEKYRSVLFEVFRSMKEELKAFLAQVSSKFSITVDFWTSFEQIFYMSVTCQWIDENWCFQKVLLDICHIPSPYGSTEIYQSLIKVLKMFNIENRVLSCTHDNSQSAMHACHTLKEDLDAQKIGPFCYLPCAARTLSLIIDDGLRSTKSIISKIREFVIELNASSEMAEDFIQMSTAYQEGTWKFPLDFSTRWSGNYQMLDIVRKGGKSMDAVIRKYEETLGSRMVLNSTEKSVAGVVHQYLEPFYKTTNNLCTSKVPTVGLVLFFMDHISETIANCRESRHSPDWLKSASEEMAKKARSYISQVCNIFTYMTAILDPRIKGELIPEGLNSDSFLEEARTHFTRNYSTTHFSSMSAGYSAQEIEDGAVSFAEEIARKKRRASMSSGTDELSQYLSEAPAPIPTDVLEWWKVNSTRYPRLSVMARDFLAMQATSVVPEELFCGRGDEINKQRFCMSHDSTQSILCIKSWFQVGIKFKFKSTEIDYERLMDMVAAGAIDSSNTASDKKQK 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0007 728 SUPERFAMILY Ribonuclease H-like 237 691 IPR012337 -
Lele23g0007 728 Pfam hAT family C-terminal dimerisation region 609 689 IPR008906 GO:0046983
Lele23g0007 728 SMART bed5 101 148 - -
Lele23g0007 728 Pfam Domain of unknown function (DUF4413) 473 553 IPR025525 GO:0003677
Lele23g0007 728 Pfam BED zinc finger 108 146 IPR003656 GO:0003677
Lele23g0007 728 PANTHER ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4 63 686 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0007 Lele-ChrLele23 36840 41813 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0007 23 36840 41813 Lele23g0007 23 36840 41813 ECH
Lele21g2011 21 26954316 26958888 Lele23g0007 23 36840 41813 hybridization