Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g2011 ATGGACTGGCGTGTAAATAGCCAGTATAGAAGTTACAAAGATGATCATAAATCAACGATGGAGGTTGCACTTATTCCAAATCAGGATCCCGTAAATCTTGGCCTTGGCTCTTCAGAAAAGGCAAATCCCATAAATTCAGTGAAGCCGAGAAAAAAAACAATGACATCAGTTTATCTTAAGTTCTTTGAGACAGCTGCTGATGGGAAGACCCGGAGATGCAAGTTTTGTGGACAAACATATTCTATTGCAACTGCCACAGGCAATTTGGGAAGGCATCTTGCCAATCGCCATCCAGGGTATGAAAAGTCAGGGGATGCTGTCAGCAATCCAGCAACTCAACATATTGCTGTGGCCAAGAAGACTCAACCTCAAGGAAAAGCAAACAAGGTCGATTATGATAATCTAAATTGGTTGCTCATTAGGTGGCTTGTTACAGCTTCTCTGCCCCTGTCAACTCTGGAGGAGAAGTGGCTAGCGAATTCCTTCAAGTTTCTAAACTCATCTATACAAATCTGGCCAAGTGAGAAGTATAGATCTGTGCTTTCTGAAGTTTTCAGAAGCATGAAGGAAGAATTGAAAGTATTTTTAGCACAAGTTTCTTCCAAGTTCTCCATCACAGTTGATTTCTGGACTTCTTTTGAACAGATCTTTTATATGAGTGTCATTTGTCAGTGGATTGATGAAAACTGGTGCTTTCAGAAAGTGCTTCTTGATATTTGTCACATACCTTCTCCTTATGGGAGTGCAGAAATATATCAGTCCCTCATTAAAGTTCTTAAAATGTACAATATTGAAAATAGAGTCCTCTCATGTACTCATGATAATAGTCAAAGTGCAATGCATGCCTGCCATACTTTGAAAGAGGACTTAGATGCTCAGAAGATAGGGCCATTCTGTTATCTCCCCTGTGCTGCTAGAACTTTGAGCTTGATTATAGATGATGGGTTGAGATCCACAAAGTCAATTATATGTAAGATCCGGGAATTTGTAATAGAATTGAATGCCTCATCAGAGATGGCTGAGGATTTTATTCAAATGTCTACGGCTTATCAAGAAGGTACTTGGAAATTTCCACTTGATGTTTCCACAAGATGGAGTGGAAATTACCAGATGCTTGACATTGTTCGCAAGGGAGGTAAATCTATGGATGCAGTTATTCGTAAATACGAGGAGACTCTTGGTAGTAGGATGGTGCTGAACTCAACTGAGAAAAGTGTGGCTAGTGTCGTGCATCAGTATCTGGAGCCATTTTACAAGACCACGAATAACCTATGCACAAGTAAGGTGCCAACAGTTGGCCTCGTCCTTTTCTTTATGGATCACATCTCAGAAACAATTGCTACCTGCAGAGAATCCCGTCACAGCCCAGACTGGCTAAAAAGCGCTGCAGAAGAAATGGCTAAAAAGGCCAGAAGTTACATTAGTCAGGTTTGCAACATATTCACATACATGACAGCTATTCTTGATCCTCGAATTAAGGGAGAGCTAATCCCCGAGGGTTTAAACTCGGATAGTTTTCTAGAGGAAGCAAGAACCCATTTTACAAGAAATTATTCTACCACTCATTTCTCATCCATGAGTGCTGGATACAGTGCTCAGGAAATTGAAGATGGAGCTGTTTCCTTTGCTGAGGAGATAGCACGCAAGAAACGACGGGCAAGCATGAGCTCTGGCACTGATGAGCTCAGTCAGTATCTTTTAGAGGCGCCCGCTCCAATACCAACTGATGTTCTGGAATGGTGGAAGGTCAATAGTACACGCTATCCACGGTTATCTGTGATGGCTAGAGATTTCCTGGCTATGCAGGCAACTTCAGTTGTGCCTGAAGAACTTTTCTGTGGCAGGGGTGATGAGATCAACAAGCAACGGTTCTGTATGTCACATGATAGCACACAATCTATTCTTTGTATCAAGTCATGGTTTCAGGTAGGCATCAAGTTCAAGTTTAAGTCAACTGAAATTGATTACGAGAGGTTAATGGACATGGTAGCTGCTGGTGCAATCGATAGTAGCAATACTGCTTCAGACAAGAAGCAAAAATGA 2043 0.4161 MDWRVNSQYRSYKDDHKSTMEVALIPNQDPVNLGLGSSEKANPINSVKPRKKTMTSVYLKFFETAADGKTRRCKFCGQTYSIATATGNLGRHLANRHPGYEKSGDAVSNPATQHIAVAKKTQPQGKANKVDYDNLNWLLIRWLVTASLPLSTLEEKWLANSFKFLNSSIQIWPSEKYRSVLSEVFRSMKEELKVFLAQVSSKFSITVDFWTSFEQIFYMSVICQWIDENWCFQKVLLDICHIPSPYGSAEIYQSLIKVLKMYNIENRVLSCTHDNSQSAMHACHTLKEDLDAQKIGPFCYLPCAARTLSLIIDDGLRSTKSIICKIREFVIELNASSEMAEDFIQMSTAYQEGTWKFPLDVSTRWSGNYQMLDIVRKGGKSMDAVIRKYEETLGSRMVLNSTEKSVASVVHQYLEPFYKTTNNLCTSKVPTVGLVLFFMDHISETIATCRESRHSPDWLKSAAEEMAKKARSYISQVCNIFTYMTAILDPRIKGELIPEGLNSDSFLEEARTHFTRNYSTTHFSSMSAGYSAQEIEDGAVSFAEEIARKKRRASMSSGTDELSQYLLEAPAPIPTDVLEWWKVNSTRYPRLSVMARDFLAMQATSVVPEELFCGRGDEINKQRFCMSHDSTQSILCIKSWFQVGIKFKFKSTEIDYERLMDMVAAGAIDSSNTASDKKQK 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g2011 680 Pfam Domain of unknown function (DUF4413) 425 505 IPR025525 GO:0003677
Lele21g2011 680 Pfam hAT family C-terminal dimerisation region 561 641 IPR008906 GO:0046983
Lele21g2011 680 SUPERFAMILY Ribonuclease H-like 189 643 IPR012337 -
Lele21g2011 680 SMART bed5 53 100 - -
Lele21g2011 680 Pfam BED zinc finger 60 98 IPR003656 GO:0003677
Lele21g2011 680 PANTHER ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4 15 638 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g2011 Lele-ChrLele21 26954316 26958888 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g2011 21 26954316 26958888 Lele21g2011 21 26954316 26958888 ECH
Lele21g2011 21 26954316 26958888 Lele23g0007 23 36840 41813 hybridization