Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1857 ATGGTGGCCGACAAGACCAAGAAGTTGAAAGTTGGGGAGAAGGGCGAGAACTTAGACGAAATTGATGGAGAGCTCATCCTCTCTATTGAAAAGCTGCAGGAAGCTCAAGACGAGCTCGAAAAGATCAATGAGGAGGCAAGTGATAAAGTTCTTGAAATAGAGCAGATGTATAATGAGATAAGGAAGCCTATCTATGAGAAGCGGAGTGAGATTATCAAAACTATTCCTGACTTCTGGACAACAGCTTTTCTGAGTCATCCTGCTCTTGGTGAGCTTCTGAATGAAGAAGATCAAAAGATATTTAAGCATTTGAGTTCTTTGGAGGTTGAAGATTTTATGGACGTCAAATCAGGCTATTCAATCACCTTTAATTTCAATCCGAATCCATATTTTGAGGATACAAAACTTACAAAGACTTATACCTTCCTTGAAGAAGGAACTACTAAGATCACTGCTACGCCTATAAAATGGAAAGAGGGCAAGGGTATTCCCAATGGAGTCCATGAGAAGAAAGGGAACAAGCGACCTCCAACTGATGACAGTTTCTTTAGTTGGTTCCGTGACGATGAGCAGAAAGATGATATGGATGACATACACGATGAGCAGATAGCAGAATTAATTAAGGACGATTTGTGGCCAAATCCGCTAACTTATTTTAATAATGAGGAGCCTGATGAAGAGGATGTTGATGAGGAAGATGATGACGATGAGGGAAAGGATGAAGATGACTCTGAGGATGATGACGAAGACCAAGAGGAAGATGAAGAAGACGGCGACGAAGATGATGGCAAGTGA 795 0.4126 MVADKTKKLKVGEKGENLDEIDGELILSIEKLQEAQDELEKINEEASDKVLEIEQMYNEIRKPIYEKRSEIIKTIPDFWTTAFLSHPALGELLNEEDQKIFKHLSSLEVEDFMDVKSGYSITFNFNPNPYFEDTKLTKTYTFLEEGTTKITATPIKWKEGKGIPNGVHEKKGNKRPPTDDSFFSWFRDDEQKDDMDDIHDEQIAELIKDDLWPNPLTYFNNEEPDEEDVDEEDDDDEGKDEDDSEDDDEDQEEDEEDGDEDDGK 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1857 264 MobiDBLite consensus disorder prediction 159 184 - -
Lele22g1857 264 SUPERFAMILY NAP-like 6 220 IPR037231 -
Lele22g1857 264 MobiDBLite consensus disorder prediction 162 184 - -
Lele22g1857 264 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 16 235 IPR002164 GO:0005634|GO:0006334
Lele22g1857 264 Coils Coil 18 59 - -
Lele22g1857 264 Pfam Nucleosome assembly protein (NAP) 73 221 IPR002164 GO:0005634|GO:0006334
Lele22g1857 264 Gene3D - 1 75 - -
Lele22g1857 264 MobiDBLite consensus disorder prediction 221 264 - -
Lele22g1857 264 MobiDBLite consensus disorder prediction 208 264 - -
Lele22g1857 264 Gene3D Nucleosome assembly protein 76 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1857 Lele-ChrLele22 23514541 23517527 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1888 21 26210901 26219592 Lele22g1857 22 23514541 23517527 ECH
Lele22g1857 22 23514541 23517527 Lele22g1857 22 23514541 23517527 ECH
Lele22g1857 22 23514541 23517527 Lele23g0127 23 816279 820566 hybridization
Lele22g1857 22 23514541 23517527 Lele24g1806 24 23120455 23123249 hybridization