Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1888 ATGGTGGCTGACAAGGCCAAGAAGTTGAAAGTTGGAGAGAAGGGTGAGAACTTAGAGGAAATTGATGGAGAGCTTGTACTCTCTATTGAAAAGCTGCAGGAAGCCCAAGACGAGCTGGAAAAGATCAATGAGGAGGCAAGTGATAAAGTTCTTGAAATAGAGCAGAAGTATAATGAGATAAGGAAGCCTATATATGAGAAGCGGAATGAGATTATCAAAGCTATTCCGGACTTTTGGATGACAGCTTTTTTGAGTCATCCTGCTCTTAGTGAGCTTCTGAATGAAGAAGATCAAAAGATATTTAAGTATTTGAGTTCTTTGGAGGTTGAAGATTTTAAGGACGTGAAATCAGGCTATTCAATTACTTTTAATTTCAGTCCCAATCCATATTTCGAGGATACAAAACTTACAAAGACATATACCTTCCTTGAAGAAGGAACTACCAAAATCACTGTTACACGTATACAATGGAAAGAGGGAAAGGGTATACCCAATGGAGTACATGAGAAGAAAGGGAACAAGCGACCTCCAACTGATGACAGTTTCTTTAGTTGGTTCAATGACGATGAGCAGAAAGATAATATGGATGCCATACATGATGAGATAGCAGAATTAATTAAGGATGATTTGTGGCCAAATCCGCTAACTTACTTTAATAACGAGGAGCCTGATGAAGAGGATGGCGATGAGGAAGGTGGTGACGATGAGGGAAAGGATGAAGATGACTCTGAAGATGATGACGAAGACCAAGAGGAAGATGAAGATGACGGTGACGAAGATGATGGCCATTGGGTATTAGCTAGTGTCTCAGCTGGTGTAGCAAGGCCGGTTGGTTGTTGTGACCATATTCTATTTATTTTGTCCGTTGAGGTACTGCGCCAATGCCCTGAAAAATGGGAAACTATTGTGAAGCCTTTGTGGCATGAGTTTCAGAAGTTACGAGATGCTCAAGAATCAATTGATGACACCAATGGGTCTTGCTCTAGGGTTTTAGGTAAGTGGAGAGGAGTTAGTGAGTGCCCTACCCTCTCTTTGCGAGAAAAAAGAGAGCAAAAGAGGAGGAGGGTGAAGATGGTGGCCGACAAGACCAAGAAGTTGAAAGTTGCTGAGAAGGGTGAGAATTTAGAGGAAATTGATGGAGAGCTTGTCCTCTCTATTGAGAAGCTGCAGGAAACACAAGATGAGCTCGAAAAGATCAATGAGGAGGCAAGTGATAAAGTTCTCGAAATAGAGCAGAAGTACAATGAGATCAGGAAGCCTGTATATGAGAAGCGGAATGAGATTATCAAAACTATTCCTGACTTCTGGACAACAGCTTTTCTGAGTCATCCTGCTCTTGGCGAGGTTCTCAATGAAGAAGATCAAAAGATATTTAAGTATTTGAGTTCTTTGGATGTCGAAGATTCTAAAGACGTCAAATCGGGCTATTCAATTACCTTTAATTTCAATCCCAATCCATATTTTGAGGATACAAAACTTACAAAGACTTATACCTTCCTTGAAGAAGGAACTACAAAGATTACTGCCACGCCTATAAAGTGGAAAGAGGGCAAGGGTATACCCAATGGAGTCCATGAGAAGAAAGGGAACAAGCGACTTCCAACTGATGACAGTTTTTTTAGTTGGTTCAGTGACATTGAGCAGAAAGATGATATTGATGACCTGCATGATGAGATAGCAGAATTAATTAAGGAGGATTTGTGGCCAAATCCGCTAACTTATTTTAATAATGAGGAGCCTGACGAAGAGGATGGTGATGAGGAAGATGGTGATGATGAGGGAAAGGATGAAGATGACTCTGAAGATGATGACGAAGACCACGAGGGAGATGAAGATGGTGGTGAGGGTGAGGAAGATGATGGCAAGTGA 1869 0.4125 MVADKAKKLKVGEKGENLEEIDGELVLSIEKLQEAQDELEKINEEASDKVLEIEQKYNEIRKPIYEKRNEIIKAIPDFWMTAFLSHPALSELLNEEDQKIFKYLSSLEVEDFKDVKSGYSITFNFSPNPYFEDTKLTKTYTFLEEGTTKITVTRIQWKEGKGIPNGVHEKKGNKRPPTDDSFFSWFNDDEQKDNMDAIHDEIAELIKDDLWPNPLTYFNNEEPDEEDGDEEGGDDEGKDEDDSEDDDEDQEEDEDDGDEDDGHWVLASVSAGVARPVGCCDHILFILSVEVLRQCPEKWETIVKPLWHEFQKLRDAQESIDDTNGSCSRVLGKWRGVSECPTLSLREKREQKRRRVKMVADKTKKLKVAEKGENLEEIDGELVLSIEKLQETQDELEKINEEASDKVLEIEQKYNEIRKPVYEKRNEIIKTIPDFWTTAFLSHPALGEVLNEEDQKIFKYLSSLDVEDSKDVKSGYSITFNFNPNPYFEDTKLTKTYTFLEEGTTKITATPIKWKEGKGIPNGVHEKKGNKRLPTDDSFFSWFSDIEQKDDIDDLHDEIAELIKEDLWPNPLTYFNNEEPDEEDGDEEDGDDEGKDEDDSEDDDEDHEGDEDGGEGEEDDGK 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1888 622 SUPERFAMILY NAP-like 364 576 IPR037231 -
Lele21g1888 622 MobiDBLite consensus disorder prediction 162 187 - -
Lele21g1888 622 Coils Coil 375 416 - -
Lele21g1888 622 MobiDBLite consensus disorder prediction 577 622 - -
Lele21g1888 622 Gene3D Nucleosome assembly protein 76 222 - -
Lele21g1888 622 Gene3D Nucleosome assembly protein 433 579 - -
Lele21g1888 622 MobiDBLite consensus disorder prediction 220 261 - -
Lele21g1888 622 MobiDBLite consensus disorder prediction 213 262 - -
Lele21g1888 622 Pfam Nucleosome assembly protein (NAP) 430 577 IPR002164 GO:0005634|GO:0006334
Lele21g1888 622 Pfam Nucleosome assembly protein (NAP) 73 220 IPR002164 GO:0005634|GO:0006334
Lele21g1888 622 MobiDBLite consensus disorder prediction 163 177 - -
Lele21g1888 622 SUPERFAMILY NAP-like 7 219 IPR037231 -
Lele21g1888 622 MobiDBLite consensus disorder prediction 569 622 - -
Lele21g1888 622 Coils Coil 18 59 - -
Lele21g1888 622 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 13 245 IPR002164 GO:0005634|GO:0006334
Lele21g1888 622 Gene3D - 1 75 - -
Lele21g1888 622 Gene3D - 358 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1888 Lele-ChrLele21 26210901 26219592 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1888 21 26210901 26219592 Lele22g1857 22 23514541 23517527 ECH
Lele21g1888 21 26210901 26219592 Lele21g1888 21 26210901 26219592 ECH
Lele21g1888 21 26210901 26219592 Lele23g0127 23 816279 820566 hybridization
Lele21g1888 21 26210901 26219592 Lele24g1806 24 23120455 23123249 hybridization