Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1339 ATGTCTCGTCACGCCATCTCAGGCGTAACGCCGGAATCTCTATCGGCGTCGGGTCGGAGCTCGGAGAAGCTGAGCCTGCCGTCACTGCAATCTAAAATGAAGTGTGACCCTGAAGGATACGAGTCTGAGCTAGTCCTCCTCTACAACCAATTCAATTCGTCATTGGAACTCTTTCAGCAACAAGCTGCGATGAATTTCACCTCTATCAGTGGAATTGGTAGCGACTCCTCCATAGCCAAAGACCTTGGTGACAGGGCTATGTTCTTGGCCCACGTCACTCCCTTCTATCCTACGAATCTTGCTGATTTCCCCAAGAAGCTGGCGGATTTGCTTCGCTCTGCTGGAAGCACCCTACTTTCTGGGCTCCGGTGTCACCTGACGCAGGCTCTCATCCTCCTCGTAAATAGACAGATTGTTGATATTAGGGAAACACTCCCATTGTTCATGGATCTCCAAACCCTTGGTGATAGAACGTTAAGAAAGTTGGCGTTTGATCATGTTGTTCATAGCATTAGGCGCATGAATCAAAAACATAAAAATGAAGCGAAGAACCGAGCACTTCAAAATGTCTTGTTTGGGATGCTACAGCAAGAAGATGTAGCGAAGGCTAAGCAATCACTGATCACTCTCTGTGAACTTCACCGGAGGAAAATCTGGTTTGATGATCGAACTGCAAATGCCATCTGTACAGCTTCCTTTCATCCATCGCCAAGGATCATGATAGCAGCTTTGTCATTTCTTTTGGATTATGAGAAGATTGAAAACGATGAAGACAGTGATAATTCTAGCAGTGAAGATGAATCATCTGCACAATCTCAAGTTCTCCTTAATAAGGAGGCAATTTACAAGGCACACCACAAAGGTACAGTAGCTAGCAAGAAAAAGAAGCAAGCTAAACTGCAGCGTGCCATGCGTAGCTTGAAAAGACAGCAACGCATGTCCTCTGGAGACAAGAACACCAGTTATTATTCACCACTTAATCACCTGAAAGATGCACAGGGTTTTGCTGAGAAGTTGTTCTCTCGCCTTCAAAACTGTAATGAACGATTCGAGGTTAGGATGATGATGTTGAAAGCGATTACTCGAACAGTTGGACTCCACCAATTGATTTTACTAAATTTATATCCCTTTCTTCAGAAATATGTTCAGCCACATCAACGAGATGTCACAAATTTGCTTGCAGCAGCAGTACAGGCTTGCCATGATATGGTTCCTCCTGATGCAGTCGAGCCCTTGTTTAAACAGATAGTAAATCAATTTGTACATGACCGCTCACGTCCAGAGGCTATTACTGTTGGATTAAATGTGGTGAGGGAGCTATGCATGCGCATGCCCTTGCTTATGACAGAGGAGTTGCTACAAGATCTTGCATTATATAAGAAGTCACATGATAAGTCAGTTTCAATTGCTTCCCGATCTCTGATTGCCTTGTTCAGAGAGGTTTGTCCTTCACTACTAATTAAGAAGGACCGTGGGCGGCCTATTGATCCTAAGGCAAGACCAAAAGCCTATGGTGAAGTTAGTGTTGCGACTGATATTCCTGGTCTTGAGTTGCTACAGACTCTTGACAGTGACAATGAGCAGGAGGGTGATGATTCAGATGACTCTATACTTAGTGGCTCTGACAATGATCAGGAAAATGGCAATGGTAATGAAGAGAACGAGGTGATTGTTGATGATGTTGGAAGTGATGATGCTGATGCTGATGGTAGTGATGTTGGATCAGAAGATGTAGATTATGATACTGAAGATGAGGAGGACAATCTTGAAGATAATGAACAGGTTGATGAAGAGGATGGTGAGGGTATGGAACATGATGATAGTGATCTAAATACATCTAGTGATGCTGATCTACATGCATCTTGTGATGATGATTCTCATGCATCTGGTGATGATGATTCTCATGCATCTGGTGATGATGAGAGCATTGATAGAAAGAGTAAAAATAATCAATCCTCAGTCAAAAAAAGGAAGCTTACTGATTCTGGTGAACAACTCAATGTTGGTGATGCAAGTCTTCGAGCTCTGAAGAAATTAGCCAAAACAGATGGAATACTTTCTAATGAGGACTTCCAAAGGATCAAGGAGCTAAAGGCAAAGAAGGAAGCTAAAAATGCATTGGCTCAGCATGGGTTAGCAAAGTCTGCAGCAGTTAAGGCTGCAAGCTTTGATCAACTTAGTATGAAACCTGTGGATGCTGCCAGGCTTGAAGTTCACATGAGGAAAAAAATGAGCAAGGACGAAAGATTGGCATTGATTAGAGCAGGGAGGGAGGATAGAGGAAAATACATGGCTCGAGCAGCTGTCAAACAGAAAAAGACGGGTGGCCTGAGCAACCGGCAGAAAGAGCATAAGAAGAAGATGCCGCTGGCTGCGAAGAGAGATAAGGCGGCGAAATCTCGTATCGAGAAAAAGAGAAAACAGAGTCGGGCTGGCAAACAGTTCCGAGGGAGGAAAGCCTGGAAACAGTAG 2472 0.4393 MSRHAISGVTPESLSASGRSSEKLSLPSLQSKMKCDPEGYESELVLLYNQFNSSLELFQQQAAMNFTSISGIGSDSSIAKDLGDRAMFLAHVTPFYPTNLADFPKKLADLLRSAGSTLLSGLRCHLTQALILLVNRQIVDIRETLPLFMDLQTLGDRTLRKLAFDHVVHSIRRMNQKHKNEAKNRALQNVLFGMLQQEDVAKAKQSLITLCELHRRKIWFDDRTANAICTASFHPSPRIMIAALSFLLDYEKIENDEDSDNSSSEDESSAQSQVLLNKEAIYKAHHKGTVASKKKKQAKLQRAMRSLKRQQRMSSGDKNTSYYSPLNHLKDAQGFAEKLFSRLQNCNERFEVRMMMLKAITRTVGLHQLILLNLYPFLQKYVQPHQRDVTNLLAAAVQACHDMVPPDAVEPLFKQIVNQFVHDRSRPEAITVGLNVVRELCMRMPLLMTEELLQDLALYKKSHDKSVSIASRSLIALFREVCPSLLIKKDRGRPIDPKARPKAYGEVSVATDIPGLELLQTLDSDNEQEGDDSDDSILSGSDNDQENGNGNEENEVIVDDVGSDDADADGSDVGSEDVDYDTEDEEDNLEDNEQVDEEDGEGMEHDDSDLNTSSDADLHASCDDDSHASGDDDSHASGDDESIDRKSKNNQSSVKKRKLTDSGEQLNVGDASLRALKKLAKTDGILSNEDFQRIKELKAKKEAKNALAQHGLAKSAAVKAASFDQLSMKPVDAARLEVHMRKKMSKDERLALIRAGREDRGKYMARAAVKQKKTGGLSNRQKEHKKKMPLAAKRDKAAKSRIEKKRKQSRAGKQFRGRKAWKQ 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1339 823 MobiDBLite consensus disorder prediction 1 28 - -
Lele22g1339 823 MobiDBLite consensus disorder prediction 768 823 - -
Lele22g1339 823 MobiDBLite consensus disorder prediction 1 32 - -
Lele22g1339 823 MobiDBLite consensus disorder prediction 287 306 - -
Lele22g1339 823 MobiDBLite consensus disorder prediction 557 605 - -
Lele22g1339 823 Pfam SDA1 448 819 IPR007949 -
Lele22g1339 823 MobiDBLite consensus disorder prediction 524 539 - -
Lele22g1339 823 PANTHER HSDA/SDA1-RELATED 21 819 IPR027312 GO:0000055|GO:0042273
Lele22g1339 823 Coils Coil 290 313 - -
Lele22g1339 823 MobiDBLite consensus disorder prediction 524 668 - -
Lele22g1339 823 SUPERFAMILY ARM repeat 86 484 IPR016024 -
Lele22g1339 823 MobiDBLite consensus disorder prediction 287 322 - -
Lele22g1339 823 MobiDBLite consensus disorder prediction 307 322 - -
Lele22g1339 823 MobiDBLite consensus disorder prediction 606 663 - -
Lele22g1339 823 MobiDBLite consensus disorder prediction 799 823 - -
Lele22g1339 823 Pfam NUC130/3NT domain 88 139 IPR012977 -
Lele22g1339 823 MobiDBLite consensus disorder prediction 776 798 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1339 Lele-ChrLele22 19173090 19178591 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1339 22 19173090 19178591 Lele22g1339 22 19173090 19178591 ECH
Lele22g1339 22 19173090 19178591 Lele23g0682 23 5285353 5290816 hybridization
Lele22g1339 22 19173090 19178591 Lele24g1296 24 18960362 18965977 hybridization