Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1337 ATGAACGACTTGTCGTTTAGGTGCCATAAAGGGACGTTCCCAACCAATCCCCTATCAGTACGATACGTCGCTGCTTTCACTTGGGATCCAAGTCTGCATCACCATCACCATCATCAACTTCTTCTTCTTCCTCCTTATTGCGCTTGTTACAGCGCTCTTCACGACCATGATCCTCTGCCTCCTACGTTCTGTCGGATCTCAATCGCAGATCCACCTTTCTTTTCACTGCCGCTTTCAAGATTCAAGACCACCATCACCTTATTGCTTTTCATCATGGACCCCGCTGCCTCTCGTCCAGCTGTAGTCATAGATAATGGCACCGGGTATACTAAGATGGGGTTCGCCGGTAACATTGAACCTTGCTTTATTGCACCAACAGTAGTCGCTGTTAACGAGTCTTTCCTTAATCCATCTAGAAGTTCTTCTAAGGCCAATTGGCTTGCGCAGCACAATGCGGGAGTCATGGCTGATCTCGATTTCTTCATTGGGGACGAGGCACTCTCCAAGTCTCGATCTAGTAATACTTACAATCTTAGTTACCCTATTCAGCACGGCCAGGTTGAAAATTGGGACGCCATGGAGCGATTCTGGCAGCAGTGCATTTTTAATTATTTGAGGTGTGATCCGGAGGATCATTATTTTCTCTTGACCGAGAGTCCGTTGACAGCACCTGAGAGTCGCGAGTATACTGGTGAAATCATGTTCGAGACATTTAATGTACCTGGACTTTACATAGCTGTAAATTCCGTGCTTGCTCTTGCCGCCGGCTACACAGCATCCAAGTGTGAGATGACAGGAGTTGTTGTGGATGTTGGAGATGGAGCTACACGTATTGTTCCTGTAGCAGATGGTTATGTTATTGGGAGTAGCATCAAATCAGTGCCTATTGCAGGAAAAGATGTTACTCTTTTTGTCCAGCAGCTCATGCGGGAAAGAGGAGAGAATGTACCGCCTCAAGACTCTTTTGAAGTTGCTCGCAAAGTGAAGGAAATGTATTGCTATACCTGTGCTGACATTGTTAAGGAGTTTAATAAGCATGACAGAGAACCAGCCAGGTATATCAAGCAATGGAGGGGTATCAAACCAAAAACGGGGGCGCCATATTCCTGTGATATTGGCTACGAACGATTTCTGGGTCCTGAGATTTTCTTTAATCCTGAGATATATAGCAGTGATTTTACCACCCCTCTGCCAGTTGTAATTGACAAGTGCATTCAGTCGGCACCAATTGACACAAGAAGAGCATTATATAAGAATATAGTTTTGTCTGGAGGAACAACTATGTTCAAGGATTTCCACAGGAGGTTACAACGTGATCTGAAGAAAATTGTGGATGCTCGTGTTCTTGCATCTGAAGCACGTCTTGGTGGTGAGGTAAAAGCGCAACCAGTAGAGGTCAATGTTCTCAGCAATCCCATCCAGAGGGTTGCAGTTTGGTTTGGAGGCTCAGTGCTTGCTTCAACACCTGAGTTTTTTGGGGCTTGCCATACAAAGGCAGAATATGAGGAATATGGAGCAAGCATATGCCGGACAAATCCAGTTTTCAAGGGGATGTACTGA 1560 0.4551 MNDLSFRCHKGTFPTNPLSVRYVAAFTWDPSLHHHHHHQLLLLPPYCACYSALHDHDPLPPTFCRISIADPPFFSLPLSRFKTTITLLLFIMDPAASRPAVVIDNGTGYTKMGFAGNIEPCFIAPTVVAVNESFLNPSRSSSKANWLAQHNAGVMADLDFFIGDEALSKSRSSNTYNLSYPIQHGQVENWDAMERFWQQCIFNYLRCDPEDHYFLLTESPLTAPESREYTGEIMFETFNVPGLYIAVNSVLALAAGYTASKCEMTGVVVDVGDGATRIVPVADGYVIGSSIKSVPIAGKDVTLFVQQLMRERGENVPPQDSFEVARKVKEMYCYTCADIVKEFNKHDREPARYIKQWRGIKPKTGAPYSCDIGYERFLGPEIFFNPEIYSSDFTTPLPVVIDKCIQSAPIDTRRALYKNIVLSGGTTMFKDFHRRLQRDLKKIVDARVLASEARLGGEVKAQPVEVNVLSNPIQRVAVWFGGSVLASTPEFFGACHTKAEYEEYGASICRTNPVFKGMY 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1337 519 FunFam Actin-related protein 3 101 265 - -
Lele22g1337 519 PANTHER ACTIN 100 506 IPR004000 -
Lele22g1337 519 FunFam Putative actin-related protein 5 478 506 - -
Lele22g1337 519 SUPERFAMILY Actin-like ATPase domain 98 256 IPR043129 -
Lele22g1337 519 CDD NBD_sugar-kinase_HSP70_actin 101 297 - -
Lele22g1337 519 Gene3D Actin; Chain A, domain 4 296 394 - -
Lele22g1337 519 FunFam Actin-related protein 3 (ARP3) 296 394 - -
Lele22g1337 519 Gene3D - 249 477 - -
Lele22g1337 519 Gene3D - 101 505 - -
Lele22g1337 519 Pfam Actin 98 510 IPR004000 -
Lele22g1337 519 SUPERFAMILY Actin-like ATPase domain 264 514 IPR043129 -
Lele22g1337 519 SMART actin_3 98 514 IPR004000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1337 Lele-ChrLele22 19146598 19153807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1337 100 509 Miscellaneous Gene Families AT2G42100 34.541 2.73e-71 230
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1337 22 19146598 19153807 Lele22g1337 22 19146598 19153807 ECH
Lele22g1337 22 19146598 19153807 Lele23g0685 23 5310689 5316795 hybridization
Lele22g1337 22 19146598 19153807 Lele24g1294 24 18940194 18946375 hybridization