Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1342 ATGTCTCGTCACCCCATATCCGGCGTAACGCCGGTATTTCTACAGGCGTCGGGTCGGAGCTCGGAGAATCTGAGCCTGCCGTCACTGCAATCTAGAATGAAGTGTGACCCTGAAGGATACGAGTCTGAGCTAGTCCTCCTCTACAACCAATTCAATTCGTCATTGGAACTCTTTCAGCAACAAGCGGCGATGAATTTCACCTCTATCAGTGGAATTGGTAGCGACTCCTCCATAGCCAAAGACCTTGGTGACAGAGCTATGTTCTTGGCCCACGTCACTTCCTTCTATCCTACGCATCTTGCTGATTTCCCCAAGAAGCTGGCGGATTTGCTTCGCTCTGCGGGAAGCACCCTATTGTCTGGGCTTCGGTGTCACCTTACGCAGGCTCTCATCCTCCTCGTAAATAGACAGATTGTTGATATTAGGGAAACACTTCAATTGTTCACGGATCTCCAAACCCTTGGTGATAGAACGTTAAGAAAGTTGGCGTTTGATCATGTTGTTCATAGCATTAGGCGCATGAATCAAAAACATAAAATGAAGCTAAGAACCGAGCACTTCAAAATGTCTTATTTGGGATGCTACAGGATCATGATAGCTGGTTTGTCATTTCTTTTGGATTATGAGAAGATTGAAAACGATGAAGACAGCGATGATTCTTGCAGTGAAGATGAATCATCTGCACAACCTCAAGTTCTCCTTAATAAGGAGACAATTTACAAGGTCAGTTGCACACCACAAAGGGTTTTTCTGAGAAGTTGTTCTCTCGCCTTCAATAATGAACGATTTGAGGATGATGATGTTGAAAGTGATTACTCGAACAGTTGGACTTCACTGATTGATTTTGCTAAATTTATATCCGTTTCTTCAGAAATGTGTTCAGCAGCAGTACAGGCCTGCCATGATATGGTTCCTCCTGATGCAGTCGAGCCCTTGTTTAAACATATAGTAAATCAATTTGTACATGACCGGTCACGTCCAGAGGTTTTCCCTTCACTACTAATTAAGAAGGACCGTGGGTGGCCCGTTGACCCTAAGGCAAGACCAAAAGCCTATGGAGAAGTTAGTGTTGCAACTGATGTTCCTGGTCTTGAGTTGCTACGGACTCTTGACAGTGATAATGACCAGGAGGAGAATGAGGTGACTGGTGATGATGTTGGAAGTGAGAATGATGATGCAGATGGTAGTGATGTTGGATCAGAAGATGTAGATAATGATACTGAAGATGAGGAGAACAATCTTGAAGATAATGAACAGGTTGATGAAGAGGATGGTGAGGGTATGGAGCATGATGATAGTGATCTAAATGCATCTAGTGATGATGATTCCCATACATCTGGTGATGATGAGAGATTGATAGAAAGAGTACAAGTAATCAACCCTCAGTCAAAAAAAGGAAGTTTATTGCTTCTGGTGAACAACTTAATGTTGGCAAAGAAGGAAGCTAAAAATGCATTGGCTCAGCATGGGTTAGCAAAGTCTGCGGCAGTTAAGGCTGCAAGCTCTGGTCAACTTAGTATGAAACCTGTGGATGCTGTTAGTCTTGAAGTTCACATGAGGAAAAAACTAAGCAAGGATGAAAGATTGGCATTGATTAGAGCAGGGAGGGAAGATAGAGGAAAATACATGGCTCGAGCAGCTGTCAAACAGAAAAAGTCTTTGAAGTGTGATCTTACGGGTGGCCTAAGCAACCGACAGAAAGAGCATAAGAAGATGCCACTGGCTGCGAAGAGAGATAAGGCGGCAAAATCTCGTATAGAGAAAGAGAAAACAGAGTCGAGCTGGCAAACAGTTCTGAGGGAGGAAAGCCTGGAAACAGTAGCTCATATGCGCACACTATTAAGTTATGAGCTATGCAGTTTTGTTTTTCATTTTCAAATGATTACTTTGATGCTTTTTTGTTATGGGAAGAGGGTATGA 1920 0.4318 MSRHPISGVTPVFLQASGRSSENLSLPSLQSRMKCDPEGYESELVLLYNQFNSSLELFQQQAAMNFTSISGIGSDSSIAKDLGDRAMFLAHVTSFYPTHLADFPKKLADLLRSAGSTLLSGLRCHLTQALILLVNRQIVDIRETLQLFTDLQTLGDRTLRKLAFDHVVHSIRRMNQKHKMKLRTEHFKMSYLGCYRIMIAGLSFLLDYEKIENDEDSDDSCSEDESSAQPQVLLNKETIYKVSCTPQRVFLRSCSLAFNNERFEDDDVESDYSNSWTSLIDFAKFISVSSEMCSAAVQACHDMVPPDAVEPLFKHIVNQFVHDRSRPEVFPSLLIKKDRGWPVDPKARPKAYGEVSVATDVPGLELLRTLDSDNDQEENEVTGDDVGSENDDADGSDVGSEDVDNDTEDEENNLEDNEQVDEEDGEGMEHDDSDLNASSDDDSHTSGDDERLIERVQVINPQSKKGSLLLLVNNLMLAKKEAKNALAQHGLAKSAAVKAASSGQLSMKPVDAVSLEVHMRKKLSKDERLALIRAGREDRGKYMARAAVKQKKSLKCDLTGGLSNRQKEHKKMPLAAKRDKAAKSRIEKEKTESSWQTVLREESLETVAHMRTLLSYELCSFVFHFQMITLMLFCYGKRV 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1342 639 PANTHER HSDA/SDA1-RELATED 328 592 IPR027312 GO:0000055|GO:0042273
Lele21g1342 639 MobiDBLite consensus disorder prediction 368 451 - -
Lele21g1342 639 MobiDBLite consensus disorder prediction 559 587 - -
Lele21g1342 639 MobiDBLite consensus disorder prediction 431 451 - -
Lele21g1342 639 Pfam NUC130/3NT domain 88 139 IPR012977 -
Lele21g1342 639 Pfam SDA1 328 599 IPR007949 -
Lele21g1342 639 MobiDBLite consensus disorder prediction 376 430 - -
Lele21g1342 639 MobiDBLite consensus disorder prediction 562 587 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1342 Lele-ChrLele21 21864449 21869931 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1342 21 21864449 21869931 Lele21g1342 21 21864449 21869931 ECH
Lele21g1342 21 21864449 21869931 Lele23g0682 23 5285353 5290816 hybridization
Lele21g1342 21 21864449 21869931 Lele24g1296 24 18960362 18965977 hybridization