Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0985 ATGTTTCACTTGAGCAACACTCTGATTGGGATCCTCAATTTCTTGACGTTCCTCTTCTCCATTCCCATCCTTTGGATGGGTATTTGGCTCAACAAACACGGCGCCACCGAGTGCGAAAAATGGCTCGACAAGGTTTTCATTGTGTTGGGTGTCTTCCTCCTCTTGGTGTCGCTCGCTGGGCTTGTCGGCGCTTGCTGCCGCATCTCCTTGCTCCTCTGGATCTACCTTGTAGTGATGTTCTTGCTCATCGTCGTCGTCTTCTGCTTCACAATCTTCGCCTTCGTCGTTACCAACAAAGGCGCCGGGCAAGTTTTATCCGGCAAAGGGTATAAGGAGTATAGGCTCGGTGATTACTCTCACTGGTTACAGAACAGGGTGAGCGACCCAAAATACTGGAAGACCATGAAGAGCTGTCTTCAGAACGGCCAATACTGCTCCGACTACCAAAAGCTGTATGGCAAAGACGATGTTAACAAGTTCAATACAGAGAAATTAACACCGCTTCAGTCTGGGTGTTGTAAGCCATCAAACGACTGTAACTTTGTATACAAGAGCCCAACTGTGTGGAACAAGGCGGCGAATTCGAATTATACGAACCCTGATTGTCGTGCTTGGAACAATGATCCCAGTGTGCTGTGCTATAACTGTAATGCATGCAAGGCAGGGATCGTGCAAGGCACTAAGACTAATTGGAAGAAGTCGGCTAAGGCTAACATAATATTCCTCATCCTCCTCATTATTGTGTACTCCATTGGGTGCTGTGCATTCAGAAATAACAGGAGGGATGACTGGAAGTGA 798 0.4749 MFHLSNTLIGILNFLTFLFSIPILWMGIWLNKHGATECEKWLDKVFIVLGVFLLLVSLAGLVGACCRISLLLWIYLVVMFLLIVVVFCFTIFAFVVTNKGAGQVLSGKGYKEYRLGDYSHWLQNRVSDPKYWKTMKSCLQNGQYCSDYQKLYGKDDVNKFNTEKLTPLQSGCCKPSNDCNFVYKSPTVWNKAANSNYTNPDCRAWNNDPSVLCYNCNACKAGIVQGTKTNWKKSAKANIIFLILLIIVYSIGCCAFRNNRRDDWK 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0985 265 ProSitePatterns Transmembrane 4 family signature. 50 72 IPR018503 GO:0016020
Lele21g0985 265 PRINTS Transmembrane four family signature 66 94 - -
Lele21g0985 265 PRINTS Transmembrane four family signature 7 30 - -
Lele21g0985 265 PRINTS Transmembrane four family signature 39 65 - -
Lele21g0985 265 PANTHER TETRASPANIN-8-RELATED 3 262 IPR044991 GO:0009734|GO:0016020
Lele21g0985 265 Pfam Tetraspanin family 6 255 IPR018499 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0985 Lele-ChrLele21 6919790 6921472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0985 1 264 Miscellaneous Gene Families AT4G28050 60.606 2.33e-119 340
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele18g0907 18 5778894 5798045 Lele21g0985 21 6919790 6921472 CCT
Lele19g0942 19 5765730 5774369 Lele21g0985 21 6919790 6921472 CCT
Lele20g0508 20 12748527 12753273 Lele21g0985 21 6919790 6921472 CCT
Lele21g0985 21 6919790 6921472 Lele21g0985 21 6919790 6921472 ECH
Lele21g0985 21 6919790 6921472 Lele23g1067 23 16221529 16231856 hybridization