Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0805 ATGGGGTTCCACATTGCCTTATTTCTCTTCTTGGGTTTTCTTCCACCGTCTTTAAGTCAAGAATTTATTCATGCTTCAATTCTAGTTAATGGAAATCAAGCGAAAGCTGAAACTGATGATAATTTCATTTGTGCTACGATTGATTGGTGGCCTCATGACAAATGTGACTACGACCACTGCCAATGGGGGTATTCATCAGTCAATAATTTGGACTTGTCTCGCCCTTTCCTTGCCAAGGCCGTACAAGCTCTGAAGCCTTTGAGGATAAGATTGGGAGGTTCTTTGCAAGACCAAGTGCTGTATGAGGTAGAAACTTTGAAGGTACCTTGCCATCCCTTTCAAAAGATGAAAGGTGGATTATTTGGATTTTCAAAGGGATGTTTGCACATGAAAAGGTGGGATGAGCTGAATCACTTTTTCAATGAAACAGGAGCCATTGTGACATTTGGCTTGAATGCACTTCACGGGAGGCACAAAATTAGTCACAATGTTTGGGGAGGAGACTGGGACTCTAGCAATGCTTATGCTTTCATTAGTTACACCATCTCAAAGGGATATAAAATCGATTCATGGGAATTTGGTAATGAGTTAAGTGGTAGTGGCATTGGTGCAAGTGTTGGTCCTGCACAGTATGGAAAAGACTTGATACGCCTTAAACAAATTTTAGATATATTATACGAGCGATCTCGGTTCAAAGCTGCACTTGTAGCTCCTGGAGGTTTCTATCAAAAGGATTGGTATAATAAGCTGCTACAGGTTTCAGGCTCTGGAATAATCGATGTTCTGACTCATCACATATACAATTTGGGCCCAGGCAGTGACCCGAATCTAGAAAAGAAGATTCTAGATCCTGGGCATTTGAACAAGGTATCGTCAACATTTGGCAATCTTTCAGAAAGCATTGAAAAAGTGGGCCCTTGGTCTTCTGCGTGGGTTGGAGAAGCTGGTGGGGCGTACAATAGTGGCAGTCGTTATGTTTCTAGCACATTTTTAAACAGCTTTTGGTACTTGGATCAACTTGGAATGGCATCCACCTATAACACCAAAGTCTATTGTAGGCAGACTTTGATTGGAGGCTACTATGGCCTACTCAATATAACCACTTTCACTCCAAATCCTGACTTTTATAGTGCGCTATTATGGCAAAGGCTTATGGGAAAGAAGGTTCTTCAGGCTTCTAGTGATTCTTCTTGGCCTTATTTGCGCACTTATGCCCATTGTTCAAAAGGAAGAGAGGGGGTAACAGTACTGTTAATCAATTTAAGCAATCACACTAATTTCATTCTCAATGTACAAAACCCTGTGGCTGCAAACAATGAAGGAACCAAAGAGGTGAAAAGCATCCGCAGAGATAGCACTTTCACTTACCATCTCAAGAAGACAGTTTCATGGGTTGGAACCAAAGGATCTTATGTCACTTTCAGAGAAGAGTACCATTTAACTCCAAAAGATCGTGACCCTCGAAGCCGTACCGTGTTCCTAAACGGTATTCCAATACAGTTGGCAAGCCAAGGAGACATTCCAAATTTGGATCCAGTGCGCAAAAATGTACAATCTCCCATTTATGTAGCTCCTCTGTCCATTGTATTTGTTGTGTACCCTAACTTTGATGCTCCAGCTTGTGTTAGCCACCAAAAGCACTAG 1644 0.4179 MGFHIALFLFLGFLPPSLSQEFIHASILVNGNQAKAETDDNFICATIDWWPHDKCDYDHCQWGYSSVNNLDLSRPFLAKAVQALKPLRIRLGGSLQDQVLYEVETLKVPCHPFQKMKGGLFGFSKGCLHMKRWDELNHFFNETGAIVTFGLNALHGRHKISHNVWGGDWDSSNAYAFISYTISKGYKIDSWEFGNELSGSGIGASVGPAQYGKDLIRLKQILDILYERSRFKAALVAPGGFYQKDWYNKLLQVSGSGIIDVLTHHIYNLGPGSDPNLEKKILDPGHLNKVSSTFGNLSESIEKVGPWSSAWVGEAGGAYNSGSRYVSSTFLNSFWYLDQLGMASTYNTKVYCRQTLIGGYYGLLNITTFTPNPDFYSALLWQRLMGKKVLQASSDSSWPYLRTYAHCSKGREGVTVLLINLSNHTNFILNVQNPVAANNEGTKEVKSIRRDSTFTYHLKKTVSWVGTKGSYVTFREEYHLTPKDRDPRSRTVFLNGIPIQLASQGDIPNLDPVRKNVQSPIYVAPLSIVFVVYPNFDAPACVSHQKH 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0805 547 SUPERFAMILY (Trans)glycosidases 38 385 IPR017853 -
Lele20g0805 547 FunFam heparanase-like protein 3 62 383 - -
Lele20g0805 547 Pfam Glycosyl hydrolase family 79, N-terminal domain 25 341 IPR005199 GO:0016020|GO:0016798
Lele20g0805 547 Gene3D Glycosidases 60 383 - -
Lele20g0805 547 PANTHER HEPARANASE-RELATED 20 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0805 Lele-ChrLele20 14818998 14822725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0805 1 541 Glycoside Hydrolase AT5G07830 59.528 0.0 682
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0915 17 20259374 20262794 Lele20g0805 20 14818998 14822725 hybridization
Lele18g0614 18 3680754 3684485 Lele20g0805 20 14818998 14822725 hybridization