Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0614 ATGGGATTCCACATTGCCTTTTTTCTCTTCTTGGTTTTTCTTCCACCGTCTTTAAGTCAAGAATTTATTCATGCTTCAATTCTAGTTAATGGAAATCAAGCGAAAGCTGAAACTGATGATAATTTCATTTGTGCTACGATTGATTGGTGGCCTCATGACAAATGTGACTACGACCACTGCCAATGGGGATATTCATCAGTCAATAATTTGGACTTGTCTCGCCCTTTCCTTGCCAAGGCCGTACAAGCTCTGAAGCCTTTGAGGATAAGATTGGGAGGTTCTTTGCAAGACCAAGTGCTGTATGATGTAGAAACTTTGAAGGTACCTTGCCATCCCTTTCAAAAGATGAAAGGTGGATTATTTGGATTTTCAAAGGGATGTTTGCACATGAAAAGGTGGGATGAGCTGAATCATTTTTTCAATGAAACAGGAGCCATTGTGACATTTGGCTTGAATGCACTTCACGGGAGGCACCACATTAGTCACAATGCTTGGGGAGGAGACTGGGACTCTAGCAATGCTTATGCTTTCATTAGTTACACCATCTCAAAGGGATATAAAATCGATTCATGGGAATTTGGTAATGAGTTAAGTGGTAGTGGCATTGGTGCAAGTGTTGACCCTGCACAGTATGGAAAAGACTTGATACGCCTTAAACAAATTTTAGATATATTATACGAGCGATCTCGGTTCAAACCTGCCCTTGTGGCTCCTGGAGGTTTCTATCAAAAGGATTGGTATAATAAGCTGCTACAGGTTTCAGGCTCTGGAATAATCAATGTTCTGACTCATCACATATACAATTTGGGCCCAGGCAGTGACCCGAATCTAGAAAAGAAGATTCTAGATCCTGGGCATTTGAGCAAGGTATCATCAATATTTGGCAATCTTTCAGAAAGCATTGAAAAAGTGGGCCCTTGGTCTTCTGCGTGGGTTGGAGAAGCTGGTGGGGCGTACAATAGTGGCAGTCGTTATGTTTCTAGCACATTTTTAAACAGCTTTTGGTACTTGGATCAACTTGGAATGGCATCCACCTATAACACCAAAGTCTATTGTAGGCAGACTTTGATTGGAGGCTACTATGGCCTTCTCAATATAACCACTTTCACTCCAAATCCTGACTTTTATAGTGCGCTATTATGGCAAAGGCTTATGGGAAAGAAGGTTCTTCAGGCTTCTAGTGATTCTTCTTCGCCTTATTTGCGCACTTATGCCCATTGTTCTAAAGGAAGAGAGGGGGTAACAGTACTGTTGATCAATTTAAGCAATCAGACTAATTTCATTCTCAATGTACAAAACCCTGTGGCTGCAAACAATGAAGGAACCAAAGAGGTGAAAAGCATCCGCAGAGATAACACTTTCACTTACCATCTCAAGAAGACAGTTTCATGGGTTGGAACCAAAGGATCTTATGTCACTTTCAGAGAAGAGTACCATTTAACTCCAAAAGATCGTGACCCTCGAAGCCGTACCGTGTTGCTAAACGGTATTCCAATACAGTTGGCAAGCCAAGGAGACATTCCAAATTTGGATCCAGTACGCAAAAATGTACAATCTCCCATTTATGTAGCTCCTCTGTCCATTGTGTTTGTTGTGTACCCTAACTTTGATGCTCCAGCTTGTGTTAGCCACCAAAAGCATTAG 1644 0.4161 MGFHIAFFLFLVFLPPSLSQEFIHASILVNGNQAKAETDDNFICATIDWWPHDKCDYDHCQWGYSSVNNLDLSRPFLAKAVQALKPLRIRLGGSLQDQVLYDVETLKVPCHPFQKMKGGLFGFSKGCLHMKRWDELNHFFNETGAIVTFGLNALHGRHHISHNAWGGDWDSSNAYAFISYTISKGYKIDSWEFGNELSGSGIGASVDPAQYGKDLIRLKQILDILYERSRFKPALVAPGGFYQKDWYNKLLQVSGSGIINVLTHHIYNLGPGSDPNLEKKILDPGHLSKVSSIFGNLSESIEKVGPWSSAWVGEAGGAYNSGSRYVSSTFLNSFWYLDQLGMASTYNTKVYCRQTLIGGYYGLLNITTFTPNPDFYSALLWQRLMGKKVLQASSDSSSPYLRTYAHCSKGREGVTVLLINLSNQTNFILNVQNPVAANNEGTKEVKSIRRDNTFTYHLKKTVSWVGTKGSYVTFREEYHLTPKDRDPRSRTVLLNGIPIQLASQGDIPNLDPVRKNVQSPIYVAPLSIVFVVYPNFDAPACVSHQKH 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0614 547 PANTHER HEPARANASE-RELATED 19 541 - -
Lele18g0614 547 FunFam heparanase-like protein 3 62 383 - -
Lele18g0614 547 Pfam Glycosyl hydrolase family 79, N-terminal domain 25 341 IPR005199 GO:0016020|GO:0016798
Lele18g0614 547 SUPERFAMILY (Trans)glycosidases 38 385 IPR017853 -
Lele18g0614 547 Gene3D Glycosidases 60 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0614 Lele-ChrLele18 3680754 3684485 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0614 1 541 Glycoside Hydrolase AT5G61250 59.633 0.0 687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele18g0614 18 3680754 3684485 Lele19g0650 19 3737305 3740727 hybridization
Lele18g0614 18 3680754 3684485 Lele20g0805 20 14818998 14822725 hybridization