Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0645 ATGGCGGGAAACGACTGGATAAACAGCTACTTGGAGGCGATCCTGGATGTCGGGCCAGGTCTCGATGATGCCAAGTCCTCTCTGCTTCTCAGAGAGAGAGGCAGATTCAGTCCCACTCGCTACTTCGTTGCCGAGGTCATCTCTGGTTTCGATGAGACTGATCTCTACCGCTCTTGGGTTCGGGCCTCTGCAACGAGGAGTCCCCAGGAGAGGAATACTAGATTGGAGAATATGTGTTGGAGGATTTGGAACTTGGCTCGGCAAAAGAAGCAGCTTGAGAATGAGGCAGCACAAAGATTGAATAAACGTCATCTTGAACGGGAAAGAGGCCGCAGGGAAGCAACTGCTGATATGTCAGAGGACTTATCAGAGGGAGAAAAAGGAGATCCAGTGAGTGAGGTTTCAGCTCATGGCGACAGTACAAGAGGAAGACTTCCTAGAATCAGTTCTGCTGATGCTATGGAGATATGGGCTAACAGTCAAAAGGGGAAGAAACTCTATATTGTACTCATAAGCATTCATGGTCTAATAAGAGGTGAGAATATGGAGCTGGGACGGGATTCTGATACTGGTGGTCAGGTCAAGTATGTTGTGGAACTTGCAAGGGCCTTGGGTTCAATGCCAGGAGTTTATAGAGTTGATTTGCTAACTAGACAAGTATCATCACCAGATGTAGATTGGAGTTATGGTGAGCCAATAGAAATGTTGACTCCAAGGAACCAAGATGATTTAACAGATGATATGGGAGAGAGCAGTGGTGCTTATATAATCCGTATACCCTTTGGTCCAAGGGATAAATATATTCCCAAAGAACATCTCTGGCCCTACATTTCTGAATTTGTTGATGGTGCTCTTGGCCACATCATACAGATGTCAAAAGCTCTTGGGGAGCAAATTGGTGGTGGGCATGCTATCTGGCCGGTTGCCATTCATGGGCACTATGCAGATGCTGGGGACTCTACTGCTCTGCTATCTGGCGCTTTAAATGTTCCAATGCTTTTCACTGGGCACTCACTTGGTAGGGATAAGTTAGAACAGCTTCTGAAGCAAGGTCGACTATCAAGGGATGAAATAAATACAACATACAAGATTATGCGTCGAATAGAAGCTGAGGAATTAGCCCTTGATGCTTCTGAAATAGTCATAACAAGCACTAGACAGGAAATAGAACAACAATGGCGTTTGTATGATGGCTTTGATCCAGTATTGGAGCGCAAAATACGAGCAAGGATCAGACGTAATGTGAGTTGTTATGGTAGATTCATGCCTCGTATGGCGACAATTCCACCCGGTATGGAGTTCCATCACATAATTCCACAAGAGGGTGATATAGAAAGTGAACCAGAGGGAAATTTGGACCATCCTGCCCCCCAAGATCCACCTATTTGGTCTGAGATAATGCGGTTCTTTACCAACCCTCGCAAGCCGATGATCCTTGCCCTTGCTAGACCAGACCCCAAAAAGAACATCACAACTTTGGTGAAAGCATTTGGAGAATGTCGTCCCCTACGAGAACTTGCAAATCTAACATTAATTATGGGTAACAGAGATGGTATTGATGAAATGTCAAGCACAAATGCTTCCGTTCTTCTCTCAGTACTTAAACTGATTGACAAGTATGATTTGTACGGGCAAGTCGCATATCCGAAACACCACAAACAATATGAAGTGCCTGACATATATCGTCTAGCTGCAAAGACAAAGGGTGTTTTTATTAATCCAGCTTTTATTGAGCCATTTGGTCTTACCTTAATTGAGGCAGCTGCTCATGGTTTGCCAATTGTTGCGACGAAAAATGGAGGCCCTGTTGATATTCATAGGGTACTTGACAATGGTCTACTTGTGGATCCCCATGATCAGCAGTCTATTTCAGATGCTCTTTTGAAACTTGTGAGCAACAAGCAATTATGGGCAAAATGTAGACAGAATGGGTTGAAGAATATTCATCTATTTTCATGGCCTGAGCATTGCAAGACTTACCTGTCTAAAATAGCCACTTGTAAACCAAGATATCCACAATGGCTGCGAAATGATGATGGTGCTGGAAGTTCTGAATCAGAATCACCAAGTGATTCCTTGAGAGATATACATGATTTATCTTTAAACCTTAAGTTTTCACTGGATGGAGAGAAGAGTGGGGAAAGTGGAAATGATAATTCCCTGGAGTCTGAAGGAAATACGGCTGATAGAAAAACTAAATTGGAGAATGCTGTGTTGTCATGGTCAAAGGGCATCTCCAAGGACACACGCAAGGGAGGAGCTACAGAAAAATCAGATCAAAATACAAATGCTGGCAAATTCCCACCACTGAGGAGGAGAAATCATCTGTTTGTCATTGCAGTGGACTGTGATACTACTGAAGGTCTTCTTGAAACCATTAAAGTGATATTTGAGTCCGCAGAAAAGGAGAGGGCTGAAGGCTCTGTCGGATTCATTTTGTCAACATCCTTCACAATATCTGAGATACACTCATTCCTGGTCTCGAGTGGCTTGAGCCCTAGTGATTTTGATGCTTATATTTGCAACAGTGGCAGTGATCTTTACTATCCATCCCTCTCTTCTGAAGATCGTGCCTTTGTGGTTGACTTGTATTATCACTCACACATTGAATACCGTTGGGGTGGGGAAGGGCTGAGGAAGACTTTGGTACGCTGGGCAGCATCAATCACTGATAAGAAGGATGATATTCAGGAGCAAATTGTGACTCCTTCCGAACAACTTTCTACTGACTACTGTTATGCTTTCAAGCTGCAAAAGCCGGGAAAGGCTCCCCCTGTTAAGGAACTTCGGAAACTTCTGAGAATCCAGGCTCTACGTGGTCATGTTATTTATTGTCAAAATGGGACAAGAATGAATGTAATTCCAGTACTGGCATCTCGTTCCCAAGCCCTCAGGTACCTCTATGTTCGATGGGGTTTTGAACTGTCGAAGATGGTGGTGTTTGTTGGAGAATGTGGGGAGACTGATTATGAAGGATTGCTTGGTGGTCAACACAAAAGTGTTATACTGAAGGGAGTTGGAAGTAGCGCAATAAGCCAACTCCATAACAATAGAAACTATCCTCTATCAGATGTCATTGCACTGGACGGCCCCAACATTGCCGAGGCTAGTGACGGTAGCAGCGGTGCCAATATCCGATCTCTGATAGAAAAAGTAGGATTTCTCAAGGACTGA 3174 0.4408 MAGNDWINSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVAEVISGFDETDLYRSWVRASATRSPQERNTRLENMCWRIWNLARQKKQLENEAAQRLNKRHLERERGRREATADMSEDLSEGEKGDPVSEVSAHGDSTRGRLPRISSADAMEIWANSQKGKKLYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPIEMLTPRNQDDLTDDMGESSGAYIIRIPFGPRDKYIPKEHLWPYISEFVDGALGHIIQMSKALGEQIGGGHAIWPVAIHGHYADAGDSTALLSGALNVPMLFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELALDASEIVITSTRQEIEQQWRLYDGFDPVLERKIRARIRRNVSCYGRFMPRMATIPPGMEFHHIIPQEGDIESEPEGNLDHPAPQDPPIWSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTNASVLLSVLKLIDKYDLYGQVAYPKHHKQYEVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSISDALLKLVSNKQLWAKCRQNGLKNIHLFSWPEHCKTYLSKIATCKPRYPQWLRNDDGAGSSESESPSDSLRDIHDLSLNLKFSLDGEKSGESGNDNSLESEGNTADRKTKLENAVLSWSKGISKDTRKGGATEKSDQNTNAGKFPPLRRRNHLFVIAVDCDTTEGLLETIKVIFESAEKERAEGSVGFILSTSFTISEIHSFLVSSGLSPSDFDAYICNSGSDLYYPSLSSEDRAFVVDLYYHSHIEYRWGGEGLRKTLVRWAASITDKKDDIQEQIVTPSEQLSTDYCYAFKLQKPGKAPPVKELRKLLRIQALRGHVIYCQNGTRMNVIPVLASRSQALRYLYVRWGFELSKMVVFVGECGETDYEGLLGGQHKSVILKGVGSSAISQLHNNRNYPLSDVIALDGPNIAEASDGSSGANIRSLIEKVGFLKD 1057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0645 1057 PANTHER SUCROSE-PHOSPHATE SYNTHASE 3-RELATED 1 1052 - -
Lele20g0645 1057 Pfam Sucrose synthase 168 390 IPR000368 GO:0005985|GO:0016157
Lele20g0645 1057 Pfam Glycosyl transferases group 1 471 645 IPR001296 GO:0016757
Lele20g0645 1057 Gene3D Glycogen Phosphorylase B; 168 664 - -
Lele20g0645 1057 CDD HAD_SPS 776 1006 IPR035659 -
Lele20g0645 1057 Coils Coil 75 107 - -
Lele20g0645 1057 FunFam Sucrose-phosphate synthase 1 432 652 - -
Lele20g0645 1057 Pfam Sucrose-6F-phosphate phosphohydrolase 781 1005 IPR006380 -
Lele20g0645 1057 MobiDBLite consensus disorder prediction 746 768 - -
Lele20g0645 1057 CDD GT4_sucrose_synthase 167 662 - -
Lele20g0645 1057 MobiDBLite consensus disorder prediction 707 729 - -
Lele20g0645 1057 Gene3D Glycogen Phosphorylase B; 432 652 - -
Lele20g0645 1057 MobiDBLite consensus disorder prediction 99 145 - -
Lele20g0645 1057 TIGRFAM sucrsPsyn_pln: sucrose phosphate synthase 1 1052 IPR012819 GO:0005985|GO:0046524
Lele20g0645 1057 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 182 662 - -
Lele20g0645 1057 MobiDBLite consensus disorder prediction 99 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0645 Lele-ChrLele20 13657030 13663162 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0645 1 1040 Glycosyltransferase AT5G20280 77.159 0.0 1653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0748 17 19107575 19113726 Lele20g0645 20 13657030 13663162 hybridization
Lele18g0776 18 4841479 4847546 Lele20g0645 20 13657030 13663162 hybridization