Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0571 ATGGATGTGGGTAGAAGAAGAGGTGGCGGAGGTGGGGCTAGAACTAGTGTGGTGCCTGGGTCGGTGTGGGAGAGCAGGATGAAGAGTGATGAAGTAAAAGGTGGGATTAAGGTCTTCAATGGAGAAGAAAGTCCTGAAGAAGGAGGCGATGGTAGAACCAGATTGAGAAGAATCTCAAACGGGAAGAGGAAGACCTGGAAATCGGATAGCTCAGAGGGTTTCGATAGGAACCTAATTCATGTAGCTCGACGGAAATCATCAGAGCCAATCAAGACTTGCGATGAATTGAGCAAGGGGCTAAGTGTTTCTTTAGATGGAATCAAGAAGAGCCCAATTGTTTCCAGGAAAATTTCTTCGTCCACGGAAAAATCCGAGAGAAGCCCCATTCTCATGAGGAAGTTAAGATCCGAATCCGTTGAGGAACCGGAAACGAATTCGAAGCAGCTCAAGAAGTCAAAATCAGAATCTATTAATCAAAACGTTGAGGTTGTCGATGGGACTGGTAATGGAAATGTGGAGAAATCAATTCGACCGAGGAAGGCGAAATTACTGCCGGACGAAGTTCTAGATGAATGTAAAGAGAAGGCCATTTCAAGCCGTTCAGAAAATGTAGGCATGGTAAAAAATCCTCCTGAATTATCTGTGGAAGTTGGTGGCGATATGATTGCTGATATTGACGACGAAGCAGGTGAAAGAGTTGAAGTAGATGAAGAGATTAAGATGGAGAAGGAGAATGTGAAGGAAATCAATGTTTCAGAGCTTAAGGCTGTGAATGAACCACAACACAAGAAGGTTCTGATCCAAAGGCCATTTCTACATGATGAAAAGCCTGTGTCAATCCTTCGCAAAGCGAGACAATCTTCCCCAATTAAAAGGCATTCTGCAATTTACAACAATTTCAGAAAATCTCGTTCAATTCCAAAGGCTGAGGAGCGCCATAGGTTTCCACAAACCCAGAGCAAATTGCAGAGTCTAGTGATGTCCTATCTTGGCCTTGCTCATCTTGCTGTCATCTTCCTCTACAGATCCTTCATTTGCAGGGGAGTTATAAACTCTGATAGCACAAATTATGTTTTGGGAGAGGAAGAAGCAATTTCGGTTGTTAAACTGATTCTGCCTTACTTGAACGAGTTCCTTTTAAAACTCAGAGCTCTCTTTTCTGGTGATCCTGGTACCACTATGAAGATGGCAGTTTTGCTGTTTGTTTTAGCCAGATGGGGAAGCTCCATAACCATTTGGAAGATGGCCAAATTCGGCTTCTTTGTGGTCTTCATGGCGCCAAAGCTTTACTCTCTCTATTCTGCACAGTTAGCTTCATACGCAAATTCTTGGGTGAAGCCAGTGAGGGAAGGTTGGGATTCATGTGGTCACAAGAAAGCAGTGGGCCTCGCCGTCTTTGGCCTCATGTGGAATCTGTCATCAGTCGTTGTTCGCATCTGGGCCGGTAAGAGCACAAGAACTCCCTCTAATTTAATTCAAGCACTCAAGAAATTCAAATGA 1500 0.44 MDVGRRRGGGGGARTSVVPGSVWESRMKSDEVKGGIKVFNGEESPEEGGDGRTRLRRISNGKRKTWKSDSSEGFDRNLIHVARRKSSEPIKTCDELSKGLSVSLDGIKKSPIVSRKISSSTEKSERSPILMRKLRSESVEEPETNSKQLKKSKSESINQNVEVVDGTGNGNVEKSIRPRKAKLLPDEVLDECKEKAISSRSENVGMVKNPPELSVEVGGDMIADIDDEAGERVEVDEEIKMEKENVKEINVSELKAVNEPQHKKVLIQRPFLHDEKPVSILRKARQSSPIKRHSAIYNNFRKSRSIPKAEERHRFPQTQSKLQSLVMSYLGLAHLAVIFLYRSFICRGVINSDSTNYVLGEEEAISVVKLILPYLNEFLLKLRALFSGDPGTTMKMAVLLFVLARWGSSITIWKMAKFGFFVVFMAPKLYSLYSAQLASYANSWVKPVREGWDSCGHKKAVGLAVFGLMWNLSSVVVRIWAGKSTRTPSNLIQALKKFK 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0571 499 MobiDBLite consensus disorder prediction 43 71 - -
Lele20g0571 499 Pfam Reticulon 326 442 IPR003388 -
Lele20g0571 499 MobiDBLite consensus disorder prediction 119 150 - -
Lele20g0571 499 MobiDBLite consensus disorder prediction 39 71 - -
Lele20g0571 499 MobiDBLite consensus disorder prediction 151 166 - -
Lele20g0571 499 PANTHER RETICULON-LIKE PROTEIN B17 1 326 IPR044647 -
Lele20g0571 499 MobiDBLite consensus disorder prediction 113 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0571 Lele-ChrLele20 13200037 13202971 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0675 17 18619445 18622017 Lele20g0571 20 13200037 13202971 hybridization
Lele18g0847 18 5315980 5319460 Lele20g0571 20 13200037 13202971 hybridization