Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0847 ATGGATGTCGGTAGAAGAAGAGGTGGCGGTGTTGGGGCTAGAACTAGTGTGGTGCCTGGGTCGGTGTGGGAGAGCAGGATGAAGAGTGATGAAGTAAAAGGGGGGATTAAGGTCTTCAATGGAGAAGAAAGTCCTGAAGAAGGAGGCGATGGTAGAACCAGATTGAGAAGAATCTCAAACGGGAAGAGGAAGACCTGGAAATCGGATAGCTCCGAGGGTTTCGATAGGAACCTAATTCATGTAGCTCGACGGAAATCATCAGAGCCAATCAAGAATTGCGATGAATTGAGCAAGGGGCTAAGTGTTTCTTTAGATGGAATCAAGAAGAGCCCAATTGTTTCCAGGAAAATTTCTTCGTCCGCGGAAAAATCCGAGAGAAGCCCCATTCTCATGAGAAAGTTAAGATCCGAAACCGTTGAGGAACCGGAAACGAATTCGAAGCAGCTCAAGAAGTCGAAATCAGAATCTATTAATCAAAACGTTGAGGATGTCGATGGAACTGGTAATGGAAATGTGGAGAAATCAATTCGACCGAGGAAGGCGAAATTACTGCCGGACGAAGTTCTAGATGAATGTAAAGAGAAGGCCATTTCAAGCCCTTCAGAAAATGTAGGCATGGTAAAAAATCCTCCTGAATTATCGGTGAAAGTTGGTGGCTATATGATTGCTGATATTGACGACGAAGTAGATGAAAGAGTTGAAGTAGATGAAGAGATAAAGATGGAGAAGGAGAATGTGAAGGAAATCAATGTTTCAGAGCTTAAGGCTGTGAATGAACCACAACACAAGAAGTTTCTGATCCAAAGGCCATTTCAACATGATGAAAAGCCTGTGTCAATCCTTCGGACAGCGAGACAATCTTCCCCAATTAAAAGGCATTCTGCAATTTACAACAATTTCAGAAAATCTCGCTCAATTCCAAAGGCTGAGGAGCGCCATAGGTTTCCACAAACCCAGAGCAAATTGCAGAGTCTAGTGGATTTAATCATGTGGAGAGAGGTCTCAAGATCAGCATTTGTCTTCGGGATTGGAACATTCATCATAATCTCATCTTCTTATGCAAAGGATATCAATATGAGCTCTATTTCAGTGATGTCCTATCTTGGCCTTGCTCATCTTGCTGTCATCTTCCTCTACAGATCCTTCATTTGCAGGGGAGTTATAAACTCTGATAGCACAAATTATGTTTTGGGAGAGGAAGAAGCAATTTCGGTAGTTAAACTGATTCTGCCTTACTTGAACGAGTTCCTGTTAAAACTCAGAGCTCTCTTTTCTGGTGATCCTGGTACCACTATGAAGATGGCAGTTTTGCTGTTTGTTTTAGCCAGATGGGGCAGCTCCATAACCATTTGGAAGATGGCCAAATTCGGCTTCTTTGTGGTCTTCATGGCGCCAAAGCTTTACTCTCTCTATTCTGCACAGTTAGCTTCATACGCAAATTCTTGGGTGAAGCGAGTGAGGGAAGGTTGGGATTCATGTGGTCACAAGAAAGCAGTGGGTCTCGCCGTCTTCGGCCTCATGTGGAATCTGTCATCAGTCGTTGTTCGCATCTGGGCCGTGTTTATGCTGATAACAGCATTAGTATATTGTCAACAAAATCAAATGGGAAGAGGTGAATGGGAGCAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGTTGGAGTTGGAGGTCAGGGAGAGGGGCAACAAGGGCATGGAGCCACTTTTCTTCAAACAAATAAACTCAAGAAAGCATTTTAA 1737 0.4335 MDVGRRRGGGVGARTSVVPGSVWESRMKSDEVKGGIKVFNGEESPEEGGDGRTRLRRISNGKRKTWKSDSSEGFDRNLIHVARRKSSEPIKNCDELSKGLSVSLDGIKKSPIVSRKISSSAEKSERSPILMRKLRSETVEEPETNSKQLKKSKSESINQNVEDVDGTGNGNVEKSIRPRKAKLLPDEVLDECKEKAISSPSENVGMVKNPPELSVKVGGYMIADIDDEVDERVEVDEEIKMEKENVKEINVSELKAVNEPQHKKFLIQRPFQHDEKPVSILRTARQSSPIKRHSAIYNNFRKSRSIPKAEERHRFPQTQSKLQSLVDLIMWREVSRSAFVFGIGTFIIISSSYAKDINMSSISVMSYLGLAHLAVIFLYRSFICRGVINSDSTNYVLGEEEAISVVKLILPYLNEFLLKLRALFSGDPGTTMKMAVLLFVLARWGSSITIWKMAKFGFFVVFMAPKLYSLYSAQLASYANSWVKRVREGWDSCGHKKAVGLAVFGLMWNLSSVVVRIWAVFMLITALVYCQQNQMGRGEWEQEEEEEEEEEVGVGGQGEGQQGHGATFLQTNKLKKAF 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0847 578 PANTHER RETICULON-LIKE PROTEIN B17 1 578 IPR044647 -
Lele18g0847 578 MobiDBLite consensus disorder prediction 43 71 - -
Lele18g0847 578 MobiDBLite consensus disorder prediction 36 71 - -
Lele18g0847 578 MobiDBLite consensus disorder prediction 119 150 - -
Lele18g0847 578 MobiDBLite consensus disorder prediction 151 166 - -
Lele18g0847 578 ProSiteProfiles Reticulon domain profile. 325 488 IPR003388 -
Lele18g0847 578 MobiDBLite consensus disorder prediction 540 554 - -
Lele18g0847 578 Pfam Reticulon 326 480 IPR003388 -
Lele18g0847 578 MobiDBLite consensus disorder prediction 539 578 - -
Lele18g0847 578 MobiDBLite consensus disorder prediction 113 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0847 Lele-ChrLele18 5315980 5319460 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele18g0847 18 5315980 5319460 Lele19g0877 19 5333201 5334355 hybridization
Lele18g0847 18 5315980 5319460 Lele20g0571 20 13200037 13202971 hybridization