Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0401 ATGTGGCTTGGTCGCTCTGTCCCTGAAAAACATGTACCTGTACCTGTAGTGTCAACTGGTTCTTTTGCTCTTGACATAGCACTAGCTGTCGGTGGACTTCCGAAGGGACGTATTGTGGAAATATATGGTCCAGAGGCTTCTGGGAAAACTACTCTTGCCTTACATGTGATTGCAGAAGCGCAGAAGCAAGGAGGCTATTGTGCTTTTATTGATGCTGAGCATTCCCTTGATAAAACGCTCGCGGAGTCTATTGCTGCTCTTGTTCCTAAAGGCGAGCTTGATGGTGAGATGGGTGGTGCTCACATGGCAATGCAAGCTAGGTTGATGGGCCAGGAACTTCGAAAATTGTGCCACTCTTTATCAATGTCCAATTGTATACTAATTTTTATAAACCAGGTCAGGTCAAAACTTTCTACTTTTGGGGGGTTTGGCGGGCCAACGGATGTTACTTATGGTGGTAATGCATTGAAATTCTATGCTTCAATGCGGCTAAATGTCAAGCGAATCGCATTTGTTAAGAAGGCAGAAGAGACTGTAGGAAGCCAGATCCATGTGAAGGTTGTGAAGAACAAGGTTGCTCCTCCATTTAAAACTTCACAGTTTGAGCTTTTGTCAAGGTTCCTGGCTAGCAACCCTAGCGCTCAAGAAGAACTTATTCTGAAGCTGAGGGAGAAGCTTCTTAGAATTGCTGAGAAAGAAGCAGCAGGGGTGACAGATGGAGATGATACAGAAGTTGTATGA 741 0.448 MWLGRSVPEKHVPVPVVSTGSFALDIALAVGGLPKGRIVEIYGPEASGKTTLALHVIAEAQKQGGYCAFIDAEHSLDKTLAESIAALVPKGELDGEMGGAHMAMQARLMGQELRKLCHSLSMSNCILIFINQVRSKLSTFGGFGGPTDVTYGGNALKFYASMRLNVKRIAFVKKAEETVGSQIHVKVVKNKVAPPFKTSQFELLSRFLASNPSAQEELILKLREKLLRIAEKEAAGVTDGDDTEVV 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0401 246 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 202 IPR027417 -
Lele20g0401 246 ProSiteProfiles RecA family profile 1. 13 77 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Lele20g0401 246 Pfam recA bacterial DNA recombination protein 82 204 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lele20g0401 246 ProSitePatterns recA signature. 155 163 IPR020584 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Lele20g0401 246 PRINTS RecA protein signature 66 95 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lele20g0401 246 PRINTS RecA protein signature 104 133 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lele20g0401 246 PRINTS RecA protein signature 152 180 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lele20g0401 246 PRINTS RecA protein signature 185 214 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lele20g0401 246 Gene3D - 12 82 IPR027417 -
Lele20g0401 246 Gene3D - 83 210 IPR027417 -
Lele20g0401 246 ProSiteProfiles RecA family profile 2. 143 204 IPR020587 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Lele20g0401 246 PANTHER RECA 82 204 IPR013765 GO:0003697|GO:0005524|GO:0006281
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0401 Lele-ChrLele20 11734056 11738299 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele18g1020 18 6810993 6814474 Lele20g0401 20 11734056 11738299 hybridization