Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g1020 ATGTGGCTTGGTCGCTCTGTCCCTGAAAAACATGTACCTGTACCTGTACCTGTAGTGTCAACTGTCTCTTTTGCTCTTGACATAGTACTAGCTGTCGGTGGACTTCCAAAGGGACGTATCGTGGAAATATATGGTCCAGAGGCTTCTGGGAAAATTACTCTTGCCTTACATGTGAGCGCAGAAGCAAGGAGATACTTGCCTGAGGTAATTACTTGGATGGACGCAGCTGTCTTTTTTACTAATAAATTTACGTGCTATTGTGCTTTTATTGATGCTGAGCATCCACTTGATAAAACACTCGCGGAGTCTATTGGTGTAAATACTCAGAAATTGCTTCTCTCTCAACCTGATTGTGGTGAACTAGCACTTACTCTTGTTGATACCTTAATTCAAAGTGAATCACTTGATGTAATTGTTGTTGATAGTGTGAGGTCAAAGCTTTCTACTTTTGGGGGGTTTGGCGGGCCAACGGATGTTACTTGTGGTGGTAATGCGTTGAAATTCTATGCTTCAATGCGGCTAAATATCAAGCGAATCGCATTTGTTAAGAAGGCAGAAGAGACTGTGGGAAGCCAGATCCCTGTGAAGGTTGTGAAGAACAAGGTTGCTCCTCCATTTAAAACTGCACAGTTTGAGCTTGAGTTTGGCAAGGGTATATGTAGAGAAGCAGAGGTGTTAGATTTGAGCTTAAAACACAAATTCATCTCTAAGTCTGGTCCATTCTACTACTACAATGGCAAGAACTTCCATGGCAAGGATGCTCTTACGAAGTTCCTGGCTAGCAACCCTAGCGCTCAAGAAGAACTTATTCTGAAGCTGAGGGAGAAGCTTCTTAGTATTGCTGAGAAAGAAGCTGCAGGGAAGCATGATTCTGCTGATACTCTCAAAGGATGCTTCACTTCTCTTCCTTGCTTGGAGGGGACCTTAAGCAACAAGGCCCTCTCAGTTGCTTGA 954 0.434 MWLGRSVPEKHVPVPVPVVSTVSFALDIVLAVGGLPKGRIVEIYGPEASGKITLALHVSAEARRYLPEVITWMDAAVFFTNKFTCYCAFIDAEHPLDKTLAESIGVNTQKLLLSQPDCGELALTLVDTLIQSESLDVIVVDSVRSKLSTFGGFGGPTDVTCGGNALKFYASMRLNIKRIAFVKKAEETVGSQIPVKVVKNKVAPPFKTAQFELEFGKGICREAEVLDLSLKHKFISKSGPFYYYNGKNFHGKDALTKFLASNPSAQEELILKLREKLLSIAEKEAAGKHDSADTLKGCFTSLPCLEGTLSNKALSVA 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g1020 317 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 219 IPR027417 -
Lele18g1020 317 ProSitePatterns recA signature. 165 173 IPR020584 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Lele18g1020 317 PANTHER RECA 143 290 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lele18g1020 317 ProSiteProfiles RecA family profile 2. 153 224 IPR020587 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Lele18g1020 317 Pfam recA bacterial DNA recombination protein 14 144 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lele18g1020 317 Pfam recA bacterial DNA recombination protein 154 219 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lele18g1020 317 SUPERFAMILY RecA protein, C-terminal domain 221 276 IPR023400 -
Lele18g1020 317 Gene3D - 15 146 IPR027417 -
Lele18g1020 317 Gene3D - 147 283 IPR027417 -
Lele18g1020 317 PRINTS RecA protein signature 248 265 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lele18g1020 317 PRINTS RecA protein signature 125 154 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lele18g1020 317 PRINTS RecA protein signature 195 224 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lele18g1020 317 PRINTS RecA protein signature 91 120 IPR013765 GO:0003697|GO:0005524|GO:0006281
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g1020 Lele-ChrLele18 6810993 6814474 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele18g1020 18 6810993 6814474 Lele20g0401 20 11734056 11738299 hybridization