Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0400 ATGGAGGAGGAGAAGCTCGGAGTCGGAGGAGGGGGGCTGGCGGGCTGTGTTCTGCTCTGCGAAATAGCTCGAAGTCGAAGGAGAAGAAGGGCTAAGAAGACGGTGATGCACGAAGAGGGATCTCAACTCAATTCAAACTTGAAAGTCTCATTTAGAACCTTCTTTACTTGCCCTCTAGGGTTTTGGCAAATTTGCTATACCTTCCCCTGTGCTTCATCCTTCATTGCAATCCACGAACGAATTTCTATGAGCAGCAACAAGGATAATTTCAATATGGCTGATCTTAGCTCTGCTCTTAAAGAGGAGGATCGAGCAGACCTCGTCAATGCTCTCAAGACCAAGATACAGAGTTTGGCTGGTCAGCACGCAGACGTTCTAGAGAGTCTATCGCCCAATGTCCGGAAGCGTGTTGAGTTTCTTAGAGAGATTCAGAGTCAACACGATGAATTAGAGGCAAAGTTTTTTGAGGAGAGGGCGGCTCTAGAAGCAAAATACCAAAAATTGTATCAACCTCTGTATACAAAGCGCTGTTATATTGTAAATGGTGTTACGGAAGTGGAAGGAGTAGTAAATGAAGCAGCAGTTAATACTGAAGAGGAGAAAGAGAAAGGTGTGCCTGCTTTCTGGCTCAATGCAATGAAAAATAACGAAGTGTTAGCTGAGGAGATTTCTGAGCGAGATGAAGGTGCTCTCAAGTTTCTTAAAGATATTAAGTGGAGCCGAATAGAAGACCCTAAAGGATTTAAGCTTGAGTTTTTCTTCGATACCAATCCTTATTTTAAGAATTCTGTCTTAACCAAAACTTATCATATGATTGATGAGGATGAACCTATACTGGAGAAAGCAATTGGGACGGAAATTGAATGGTATCCAGGAAAGTGCTTGACACAGAAGGTGCTTAAGAAAAAGCCTAAGAAGGGTTCAAAGAATGCTAAACCAATCACGAAAACTGAAAATTGTGAAAGTTTCTTCAATTTTTTCAATCCCCCACAAGTTCCTGAAGATGATGAAGATATTGACGAAGATATGGCTGAAGAACTTCAGAACCAGATGGAACAAGATTATGACATTGGGTCAACTGTAAGAGACAAGATTATCCCCCATGCTGTTTCATGGTTTACCGGGGAGGCCATTCAAGGAGAGGAGTTTGGAGAACTAGAGGATGACGAGGATGATGATGAAGACACTGAGGAGGATGAAGGGGAGGAGGATGAAGAGGATGATGATGATGAAGAAGATGAGGAAGAACACAAGAGCAAAAAGAAGTCATCAGCACACAAGAAGAGTGGAAGAGTGCAGGTAGGAGTTAAGCCGGTTGAGCAACCTCCAGAGTGCAAGCAGCAGTAG 1347 0.4313 MEEEKLGVGGGGLAGCVLLCEIARSRRRRRAKKTVMHEEGSQLNSNLKVSFRTFFTCPLGFWQICYTFPCASSFIAIHERISMSSNKDNFNMADLSSALKEEDRADLVNALKTKIQSLAGQHADVLESLSPNVRKRVEFLREIQSQHDELEAKFFEERAALEAKYQKLYQPLYTKRCYIVNGVTEVEGVVNEAAVNTEEEKEKGVPAFWLNAMKNNEVLAEEISERDEGALKFLKDIKWSRIEDPKGFKLEFFFDTNPYFKNSVLTKTYHMIDEDEPILEKAIGTEIEWYPGKCLTQKVLKKKPKKGSKNAKPITKTENCESFFNFFNPPQVPEDDEDIDEDMAEELQNQMEQDYDIGSTVRDKIIPHAVSWFTGEAIQGEEFGELEDDEDDDEDTEEDEGEEDEEDDDDEEDEEEHKSKKKSSAHKKSGRVQVGVKPVEQPPECKQQ 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0400 448 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Lele20g0400 448 FunFam Nucleosome assembly protein11 200 376 - -
Lele20g0400 448 MobiDBLite consensus disorder prediction 381 414 - -
Lele20g0400 448 Gene3D Nucleosome assembly protein 200 376 - -
Lele20g0400 448 SUPERFAMILY NAP-like 112 394 IPR037231 -
Lele20g0400 448 FunFam Nucleosome assembly protein 1-like 1 127 185 - -
Lele20g0400 448 Pfam Nucleosome assembly protein (NAP) 135 376 IPR002164 GO:0005634|GO:0006334
Lele20g0400 448 Gene3D - 127 186 - -
Lele20g0400 448 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 115 393 IPR002164 GO:0005634|GO:0006334
Lele20g0400 448 MobiDBLite consensus disorder prediction 375 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0400 Lele-ChrLele20 11726660 11730556 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0499 17 17204981 17215874 Lele20g0400 20 11726660 11730556 hybridization
Lele18g1021 18 6819379 6822663 Lele20g0400 20 11726660 11730556 hybridization