Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g1053 ATGGCGAAATCCGAAGTGCCTGAGAGTGAGGGATCCTCAGGTGGTGGTGTCACGAGCGATTGGGACACCCTACGCTGCTCTATTTTGCGCCGGAGGCCATCCGTCGGAGGTTTGTTCGACGATTCGTCGCTGGAACGGGATATTCCATCGGAAGATATGGTTAGTGATTCTGGCTCGAAGGGTTTCGTGGCCACCGAAGCCAAGAGCGGTGAGGAGAATAAGGATCGTTTGAAGGTGGACAACGCGGCTGTTAATGCGAATCGAGAAAAAGTGGTGGATGTCTCTGCGTTGAAATTCCTTTACCGTCCTTCGGTTCCAGTTCATCGGTCAGTGAAGGAAAGCCCGCTCAGCTCCGATACAATTTTCCATCAGAGTCATGCAGGCCTTTTAAATCTCTGTATAGTAGTGCTTGTTGCTGTGAACAGCAGACTTATAATTGAGAATTTAATGAAGTCTTACACTTGCAATATTTCCAGTTGCTTCGTATTTGGTGGAAATTCTTGCGCAACGAAAGCAAATTTATGGACAAGCTATTATCTCACTTCATATATTCATTACAACTGCTGCAGTCTTGTATCCAGTGGTGGTAATCCTCAGGAAACTTTGTTCAGTGTGAGAACTTCAGATGAATTGTCATTGCAGCATATGAGAAGGATACGTAGCCCTTTGATGAATAATTCTTTGAAGCACATAGACTATTGTAATTCTGCCTTTTTATCAGGTGTCACATTGATGTTATTGGCTTGCATTCTGTGGTTAAAACTGGTATCTTATGCGCATACAAACAGTGATTCAAGAGCACTAAGCAAATCAATTGATAAGGGAGAAGAATCGCCCAATAATTTGAAAATGGAGTATTCTTATACCGTAAGCTTCAAGAGCTTGGTGTACTTCATGGTAGCTCCTACCTTGTGTTACCAGCCAAGCTATCCTCGCACACCTTCCATACGAAAAAGATGGGTGTTTCGTCAAGTTGTTAAGCTGATAATATTTACTGGAGTCATGGGGTTTATCATAGAACAATATATTAATCCAATTGTTCAAAATTCTCAACATCCTTTGAAGGGAAACCTTCTATATGCCATTGAGAGAGTTCTGAAGCTTTCTGTTCCAGTTTTATACGTGTGGCTCTGCATGTTCTACTGCTTTTTTCACCTTTGGTTTAACATACTTGCAGAGCTTCTTCGATTTGGTGATCGTGAATTCTACAAAGATTGGTGGAATGCCCAAACTGTTGAAGAATATTGGAGAATGTGGAATATGCCTGTGCACAAATGGATGGTCCGCCATTTATATTTTCCATGCTTAAGGAATGGCATACCCAAGGGTGTGGCTGTTCTGATTTCATTTTTTGTCTCTGCTGTCTTCCATGAGCTATGCATTGCCGTTCCCTGCCACATGTTTAAGTTGTGGGCTTTTATTGGAATCATGTTTCAGGTTCCTTTGGTCATGATCACCAATTACCTGCAAAATAAGTATGCAAACTCTATGATTGGAAATATGGTTGAAGTTAATGAAAAGAACTCAAGTGGCTGTGCAACACATTGTGATGGATCAATTGTCTCGGGCAAAAGAAAAGGCAGGGACAAGAATGCGGTTGGCAGTGGTCCTATTCATAGATCCAAATCGTACGCTGATGGGAGGATGCAGATTGAGGCCTACACCGGCACCGGAACTGCTTCCACCGGCGGCTTCCATGGCATGCAAGACCTCCGGTGCTACAGTGCTTCATACGCATCCTCTGTTCCTTCTTCAACCACCCAAAATCAGATTGGGGTCAATGATGTGAAATTCAAGAAGGGCAAATCCACTAACAGCTCCTCGTCTAAAAGCTGGAGTTTCAGTGATCCAGAGTTGCAGAGGAAAAAGAGGGTCGCTAGTTACAAGGTGTATACTGTTGAAGGTAAATTGAAAGGATCTTTCAGGAAGAGCTTCAAGTGGCTCAAGGACAGGTTTAGTAATATGCATCCCTTAAACTTGCCTATTCTCAATAACAAGCTTGCCAGCCAATTTTTTGGACTTTCAATTTATATTTCATCCATGAATTGTTGA 2052 0.4269 MAKSEVPESEGSSGGGVTSDWDTLRCSILRRRPSVGGLFDDSSLERDIPSEDMVSDSGSKGFVATEAKSGEENKDRLKVDNAAVNANREKVVDVSALKFLYRPSVPVHRSVKESPLSSDTIFHQSHAGLLNLCIVVLVAVNSRLIIENLMKSYTCNISSCFVFGGNSCATKANLWTSYYLTSYIHYNCCSLVSSGGNPQETLFSVRTSDELSLQHMRRIRSPLMNNSLKHIDYCNSAFLSGVTLMLLACILWLKLVSYAHTNSDSRALSKSIDKGEESPNNLKMEYSYTVSFKSLVYFMVAPTLCYQPSYPRTPSIRKRWVFRQVVKLIIFTGVMGFIIEQYINPIVQNSQHPLKGNLLYAIERVLKLSVPVLYVWLCMFYCFFHLWFNILAELLRFGDREFYKDWWNAQTVEEYWRMWNMPVHKWMVRHLYFPCLRNGIPKGVAVLISFFVSAVFHELCIAVPCHMFKLWAFIGIMFQVPLVMITNYLQNKYANSMIGNMVEVNEKNSSGCATHCDGSIVSGKRKGRDKNAVGSGPIHRSKSYADGRMQIEAYTGTGTASTGGFHGMQDLRCYSASYASSVPSSTTQNQIGVNDVKFKKGKSTNSSSSKSWSFSDPELQRKKRVASYKVYTVEGKLKGSFRKSFKWLKDRFSNMHPLNLPILNNKLASQFFGLSIYISSMNC 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g1053 683 PANTHER STEROL O-ACYLTRANSFERASE 63 502 IPR014371 GO:0008374
Lele19g1053 683 MobiDBLite consensus disorder prediction 523 542 - -
Lele19g1053 683 MobiDBLite consensus disorder prediction 1 21 - -
Lele19g1053 683 Pfam MBOAT, membrane-bound O-acyltransferase family 285 487 IPR004299 -
Lele19g1053 683 PIRSF Oat_ACAT_DAG_ARE 29 502 IPR014371 GO:0008374
Lele19g1053 683 MobiDBLite consensus disorder prediction 34 68 - -
Lele19g1053 683 PIRSF Oat_dag 40 504 IPR027251 GO:0004144|GO:0019432
Lele19g1053 683 Pfam Domain of unknown function (DUF3511) 614 655 IPR021899 -
Lele19g1053 683 MobiDBLite consensus disorder prediction 593 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g1053 Lele-ChrLele19 6798337 6809161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g1053 99 502 Lipid Metabolism Gene Families AT2G19450 63.462 9.92e-177 512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0486 17 17108210 17115570 Lele19g1053 19 6798337 6809161 hybridization
Lele18g1031 18 6892120 6903376 Lele19g1053 19 6798337 6809161 hybridization