Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0486 ATGGCGAAATCCGAAGTGTCTGAGAGTGAGGGCGCCTCAGGTGGGGGTGTCACGAGCGATTGGGACACCCTACGCCGCTCTATTTTGCGCCGGAGGCCATCCGTCGGAGGTTTGTTCGACGATTCGTCGCTGGAACGGGATATTCCATCGGAAGATATGGTTAGTGATTCTGGCTCGAAGGATTTCGTGGCCACCGACTCCAAGAGCGGTGAGGAGGATAAGGATCGTTTGAAGGTGGAAAACGCGGCTGTTAATGCGAATCGAGAAAAAGCGGTGGATGTCTCCGCGCTCAAATTCCTTTACCGTCCTTCGGTTCCAGTTCATCGGTCAGTGAAGGAAAGCCCGCTCAGCTCCGATACAATTTTCCATCAGAGTCATGCAGGCCTTTTAAATCTCTGTATAGTAGTGCTTGTTGCTGTGAACAGCAGACTTATAATTGAGAATTTAATGAAGTATGGTTGGTTGATTAAGTCTGGCTTCTGGTTTAGCTCAAAATCTTTGAGAGATTGGCCACTCTTCATGTGTTGTCTTACACTTGCAATATTTCCAGTTGCTTCGTATTTGGTGGAAATTCTTGCACAACGAAAGCAAATATCTGAACCAGCTATTATCTCACTTCATATATTCATTACAACTGCTGCAGTCTTGTATCCAGTCATAGTAATCCTCAGGTGTAATTCTGCCTTTTTATCAGGTGTCACATTGATGTTGTTGGTTTGCATTCTGTGGTTAAAACTGGTATCTTATGCGCATACAAACAGTGATTCAAGAGCACTAAGCAAATCAATTGAAAAGGGAGAAGAACCGCCCAATAATTTGAAAATGGAGTATTCTTATACCGTAAGCTTCAAGAGCTTAGTGTACTTCATGGTAGCTCCTACATTGTGTTACCAGCCAAGTTATCCTCGCACGCCTTCCATACGAAAGAGATGGGTCTTTCGTCAAGTTGTTAAGCTGATAATATTTACTGGAGTCATGGGGTTTATAATAGAACAATATATTAATCCAATTGTTCAAAATTCTCAACATCCTTTGAAGGTAAACCTTCTATATGCCATTGAGAGAGTTCTGAAGCTTTCTGTTCCAGTTTTATACGTATGGCTCTGCATGTTCTACTGCTTTTTTCACCTTTGGTTTAACATACTTGCAGAGCTTCTTCGATTTGGTGATCGTGAATTCTACAAAGATTGGTGGAATGCACAAACTGTTGAAGAATATTGGAGAATGTGGAATATGCCTGTGCACAAATGGATGGTCCGCCATTTATATTTTCCATGCTTAAGGAATGGCATACCCAAGGGTGTTGCTGTTCTGATTTCATTTTTTGTCTCTGCTGTCTTCCATGAGCTATGCATTGCCGTTCCCTGCCACATGTTTAAGTTGTGGGCTTTTATTGGAATCATGTTTCAGGTTCCTTTGGTCATGATCACCAATTACCTTCAAAATAAGTACGCAAACTCTATGATTGGAAATATGGTTTTCTGGTTCATATTTAGTATTCTTGGTCAACCTATGTGCGTACTGTTATATTACCATGACCTGATGAACAGGAACAAGGGAATTGGCTAA 1569 0.4194 MAKSEVSESEGASGGGVTSDWDTLRRSILRRRPSVGGLFDDSSLERDIPSEDMVSDSGSKDFVATDSKSGEEDKDRLKVENAAVNANREKAVDVSALKFLYRPSVPVHRSVKESPLSSDTIFHQSHAGLLNLCIVVLVAVNSRLIIENLMKYGWLIKSGFWFSSKSLRDWPLFMCCLTLAIFPVASYLVEILAQRKQISEPAIISLHIFITTAAVLYPVIVILRCNSAFLSGVTLMLLVCILWLKLVSYAHTNSDSRALSKSIEKGEEPPNNLKMEYSYTVSFKSLVYFMVAPTLCYQPSYPRTPSIRKRWVFRQVVKLIIFTGVMGFIIEQYINPIVQNSQHPLKVNLLYAIERVLKLSVPVLYVWLCMFYCFFHLWFNILAELLRFGDREFYKDWWNAQTVEEYWRMWNMPVHKWMVRHLYFPCLRNGIPKGVAVLISFFVSAVFHELCIAVPCHMFKLWAFIGIMFQVPLVMITNYLQNKYANSMIGNMVFWFIFSILGQPMCVLLYYHDLMNRNKGIG 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0486 522 PIRSF Oat_dag 18 521 IPR027251 GO:0004144|GO:0019432
Lele17g0486 522 PIRSF Oat_ACAT_DAG_ARE 4 521 IPR014371 GO:0008374
Lele17g0486 522 Pfam MBOAT, membrane-bound O-acyltransferase family 276 508 IPR004299 -
Lele17g0486 522 PANTHER STEROL O-ACYLTRANSFERASE 61 518 IPR014371 GO:0008374
Lele17g0486 522 MobiDBLite consensus disorder prediction 1 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0486 Lele-ChrLele17 17108210 17115570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0486 99 522 Lipid Metabolism Gene Families AT2G19450 74.292 0.0 668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0486 17 17108210 17115570 Lele19g1053 19 6798337 6809161 hybridization
Lele17g0486 17 17108210 17115570 Lele20g0391 20 11666624 11673825 hybridization