Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g1039 ATGGGCTCCGACAAGGATAACTTCAGCATGGCAGATCTCAGCTCTGCTCTTAATGAGGAGAATCGAGCGGACCTAGTCAATGCTCTCAAGAATAAGATCCAGAGTCTGGCTGGGCAGCACACGGATGTTCTCGAGAGTCTGACACCTAATGTCAGGAAGCGCGTTGAGGTTCTTAGAGAGATCCAGGGTCAACATGATGAATTAGAAGCGAAATTTTTTGAGGAGAGAGCAGCTCTTGAAGCCAAATACCAAAAATTGTATCAACCATTGTATACAAAGCGGTATGATATTGTAAATGGTGTTGCTGAAGTGGAAGGAGTAGCAAATGAAACTGCAGCTGATACAGAAGAGGATAAAGAGAAAGGCGTGCCTGCTTTCTGGCTCACTGCCATGAAAAATAACGAAGTGTTAGCTGAGGAGATTTCTGAGCGAGATGAAGGTGCTCTCAAGTATCTCAAAGATATTAAATGGAGCAGGATAGAAAGTCCCAAAGGGTTTAAGCTTGAGTTTTACTTCGATACTAATCCTTATTTTAAGAATTCTGTCTTGACAAAAACTTATCATATGATTGATGAAGATGAACCTATTCTGGAGAAAGCAATTGGCACGGAAATTGAATGGTACCCTGGCAAGTGCTTGACCCAGAAGCTGCTCAAGAAAAAGCCCAAGAAGGGTTCAAAGAATGCTAAACCAATTACTAAAACCGAAAATTGTGAAAGTTTCTTCAATTTTTTCAACCCACCACAGGTCCCTGAAGATGATGAAGACATTGATGAAGATTTGGCCGAGGAACTTCAGAACCAGATGGAACAAGACTATGATATTGGGTCAACAATAAGAGACAAGATTATTCCCCATGCTGTATCATGGTTTACTGGGGAGGCCATTCAAGGAGAGGAGTTTGGAGACCTAGAGGATGATGAAGATGATGACATTGAAGAAGAAGATGATGAAGAGGAAGAGGATGATGAAGATGAGGATGAAGATGAGGACGACGATGAAGAGGAAGAACAAACCAAGAGCAAAAAGAAGAAGAGTGGAAGACCACAGGTTGGAGGACAGCAGGGTGAGCAACCTCCAGAATGCAAACAGCAGTAG 1098 0.4253 MGSDKDNFSMADLSSALNEENRADLVNALKNKIQSLAGQHTDVLESLTPNVRKRVEVLREIQGQHDELEAKFFEERAALEAKYQKLYQPLYTKRYDIVNGVAEVEGVANETAADTEEDKEKGVPAFWLTAMKNNEVLAEEISERDEGALKYLKDIKWSRIESPKGFKLEFYFDTNPYFKNSVLTKTYHMIDEDEPILEKAIGTEIEWYPGKCLTQKLLKKKPKKGSKNAKPITKTENCESFFNFFNPPQVPEDDEDIDEDLAEELQNQMEQDYDIGSTIRDKIIPHAVSWFTGEAIQGEEFGDLEDDEDDDIEEEDDEEEEDDEDEDEDEDDDEEEEQTKSKKKKSGRPQVGGQQGEQPPECKQQ 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g1039 365 Gene3D Nucleosome assembly protein 118 294 - -
Lele19g1039 365 FunFam Nucleosome assembly protein11 118 294 - -
Lele19g1039 365 FunFam Nucleosome assembly protein 1-like 1 45 103 - -
Lele19g1039 365 MobiDBLite consensus disorder prediction 351 365 - -
Lele19g1039 365 Gene3D - 45 104 - -
Lele19g1039 365 SUPERFAMILY NAP-like 29 293 IPR037231 -
Lele19g1039 365 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 32 316 IPR002164 GO:0005634|GO:0006334
Lele19g1039 365 Pfam Nucleosome assembly protein (NAP) 53 294 IPR002164 GO:0005634|GO:0006334
Lele19g1039 365 MobiDBLite consensus disorder prediction 294 365 - -
Lele19g1039 365 MobiDBLite consensus disorder prediction 299 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g1039 Lele-ChrLele19 6686932 6690284 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0499 17 17204981 17215874 Lele19g1039 19 6686932 6690284 hybridization
Lele18g1021 18 6819379 6822663 Lele19g1039 19 6686932 6690284 hybridization