Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0743 ATGCCACATTTTGAGCCACCCCTTCTCAGAATTTCTCCCATAAAGTGCCTCTTACAGGAAAATTCTCTGACTTGTCTGCTCCTAAAGACTTTCTTCATGGAGGATCATCAGAATTCAACGCCTAATGCTATTGGCCTCTGTCTCCTCCCATCTGAGCTTATGCAGAACATATTTCTCTCTCTGGTTTTACCCGAAATCATTCGGTTGAAGTTGGTCAGCAAATCATTTTCCGACATCATCTCCGATCAGAGCTTCGTCCGTGAGTGTAATTCACGGTCCAGCTCCACCGCGTGGCTATTCGTCTACAAGAAACGGTGGCTCCGCGACGCTGTCCTCCACGGTTTCACCGACCGCTCCGACCGATGGTTCCGTATCCCGATCACGGAGCTCCTGAAGCCCATCCATTTCCACTCGGAAGATCTCTACTTCCTGACCGCCTCCGGGAATGTCTTCCTCTTCGCCTCCAACACCGTGAGGGAAGTTATTGCGGTTAATCTAGTCACCATGACCGTTAAGAAAATCCCTCCCAGCCCCTTGGGACCACGCGGCACCTCCTCCTGGCGAAGATCAGGCATGAAGCTAGTGACCGGCCCATCCGGGTCGGCCCATTTCAGATTCATATTCGCAGAGTTCGTCAATAACCGCCCGGTCCTCTTCGTGTACAACTCCATCACAGACACATGGAAGTCTGTCGAAGCACAAGAAGAGAGAGGCCACAACCACAATCCCGCACGTGGGAAGCAGGTAAGTCAGGAAGAAGAAGACGACAAACGAATATTCCTGAACGTGATCAACGGTCGGAGAGTGAGCGTGCTGGTGGCGTGGAAACCGGCGTGCGAGACGGCAGTGGTGGTGCGGCCGAGATTCGAGAGAAGAGGCGGAGAGGGGGAGAGAGAGGGGGAGATGAGGGTAGGTTTCAGCTGGGGGAACGTGATGGACAGATTACACGTGTACGGTGATGGGTACATGATGATCGTGGAATCAGAAGCAGGAGGAGGAAGGGATGGGAAGAAGAGAGTGTTGAAGGGGATAGAGATGTGGGGAGTGAAGGGAAGAACGGGGAGTGAATGGGAATTCATATCAAAGGCACCAATTGAAGTGATGAAGAAGATGGAGAGAGTTTACGGGGTGATGATGGGTTGTTTGGATCAGAGGAATGGGGTGATTAGGGCATGTTTGGTAACCAATTGGGAAGGCGTTTGGGACATCATGTGGGTCTCATTCCAACCAAACACTAACCAATGGTCATGGATTCCACTTCCTGACTGTAAGATGAAAGGTTTTAACTTGGCTGGTATTAGCTTCTCCTCTGGCCTCACCTTGCTTTAA 1329 0.5132 MPHFEPPLLRISPIKCLLQENSLTCLLLKTFFMEDHQNSTPNAIGLCLLPSELMQNIFLSLVLPEIIRLKLVSKSFSDIISDQSFVRECNSRSSSTAWLFVYKKRWLRDAVLHGFTDRSDRWFRIPITELLKPIHFHSEDLYFLTASGNVFLFASNTVREVIAVNLVTMTVKKIPPSPLGPRGTSSWRRSGMKLVTGPSGSAHFRFIFAEFVNNRPVLFVYNSITDTWKSVEAQEERGHNHNPARGKQVSQEEEDDKRIFLNVINGRRVSVLVAWKPACETAVVVRPRFERRGGEGEREGEMRVGFSWGNVMDRLHVYGDGYMMIVESEAGGGRDGKKRVLKGIEMWGVKGRTGSEWEFISKAPIEVMKKMERVYGVMMGCLDQRNGVIRACLVTNWEGVWDIMWVSFQPNTNQWSWIPLPDCKMKGFNLAGISFSSGLTLL 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0743 442 Pfam F-box domain 48 87 IPR001810 GO:0005515
Lele19g0743 442 SUPERFAMILY F-box domain 34 106 IPR036047 GO:0005515
Lele19g0743 442 ProSiteProfiles F-box domain profile. 43 89 IPR001810 GO:0005515
Lele19g0743 442 PANTHER BNACNNG10540D PROTEIN 48 422 - -
Lele19g0743 442 SMART fbox_2 49 89 IPR001810 GO:0005515
Lele19g0743 442 Gene3D - 33 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0743 Lele-ChrLele19 4376206 4377534 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0823 17 19637256 19638485 Lele19g0743 19 4376206 4377534 hybridization
Lele18g0702 18 4286302 4287528 Lele19g0743 19 4376206 4377534 hybridization