Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0702 ATGGAGGATCAACAGAATTCAACGCCTAATGCTATTGGCCTCTGTCTCCTCCCATCTGAGCTTATGCAGAACATCTTTCTCTCCCTGGTTTTACCCGAAATCATTCGGTTGAAGTTGGTCAGCAAATCGTTTTCTGACATCATCTCCGATCAGAGCTTCGTCCGTGAGTGTAATTCACGGTCCAGCTCCACCGCGTGGCTCTTCGTCTACAAGAAACGGTGGCTCCGCGACGCAGTCCTCCACGGTTTCACTGACCGCTCCAACCGATGGTTCCGGATCCCGATCACGGAGCTCCTGAAGCCCATCCATTTCCACTCTGAGGATCTATACTTCCTGACGGCCTCCGGGAACGTCTTCCTCTTCGCTTCCAACACTGTGAGGGAAGTTATTGCGGTTAATCTAGTCACCATGACCGTTAAGAAAATCCCTCCCAGCCCGTTGGGCCCACGCGGCACCTCCTCCTGGCGAAGATCAGCCATGAAGCTGGTCTCCGGCCCACCCGGGTCGGCCCATTTCCGATTCATATTCGCAGAGTTCGTCAATACCCGCCCGATCCTCTTCGTGTACAACTCCATCACAGACACATGGAAGTCCATCGAAGCAGAAGAAGAGACAACAAACAGAGGCCACAGTTCCGCACGTGGGAAGCAGGTAAGTGAAGAAGAAGAGGAACGCATATTCCTGAACGTGATCAACGGTCGGAGAGAGAGCGTGCTGGTGGCGTGCACACCGGAGTGCGAGGGCGCAGTGGTGGTCCGGCCGAGATTGGAGAGAAGAGGCGGCGAGGGAGAGAGAGAAGGAGAGATGAGGGTAGGTTTCAGCTGGGGGAACGTGATAGACAGATTACACGTGTACGGTGATGGGTACATGATGATCGTGGAATCAGAAGCAGGGGGGAGAGATGGGAAGAAGAGGGTGTTGAAGGGGATAGAGATGTGGGGAGTGAAGGGAAGAAAAGGGAGAGAGTGGGAATTCATATCAAAGGCACCAATTGAAGAGATGAAGAAGATGGAGAGAGTTTATGGGGTGATGATGGGTTGCTTGGAGCAGAGGAACGGAGTGATAAGGGCTTGTTTGGTAACAAATTGCGAAGGCGTTTGGGACATCATGTGGATCTCATTCCAACCAAACACTAATCAATGGTCATGGATTCCACTGCCTGACTGTAAAATAAAAGGTTTTAACTTGGCTGGTATAAGCTTCTCCTCTGGCCTCGCCTTGCCTTAA 1227 0.5208 MEDQQNSTPNAIGLCLLPSELMQNIFLSLVLPEIIRLKLVSKSFSDIISDQSFVRECNSRSSSTAWLFVYKKRWLRDAVLHGFTDRSNRWFRIPITELLKPIHFHSEDLYFLTASGNVFLFASNTVREVIAVNLVTMTVKKIPPSPLGPRGTSSWRRSAMKLVSGPPGSAHFRFIFAEFVNTRPILFVYNSITDTWKSIEAEEETTNRGHSSARGKQVSEEEEERIFLNVINGRRESVLVACTPECEGAVVVRPRLERRGGEGEREGEMRVGFSWGNVIDRLHVYGDGYMMIVESEAGGRDGKKRVLKGIEMWGVKGRKGREWEFISKAPIEEMKKMERVYGVMMGCLEQRNGVIRACLVTNCEGVWDIMWISFQPNTNQWSWIPLPDCKIKGFNLAGISFSSGLALP 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0702 408 Pfam F-box domain 16 55 IPR001810 GO:0005515
Lele18g0702 408 Gene3D - 4 78 - -
Lele18g0702 408 SUPERFAMILY F-box domain 5 74 IPR036047 GO:0005515
Lele18g0702 408 PANTHER BNACNNG10540D PROTEIN 16 388 - -
Lele18g0702 408 SMART fbox_2 17 57 IPR001810 GO:0005515
Lele18g0702 408 ProSiteProfiles F-box domain profile. 11 57 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0702 Lele-ChrLele18 4286302 4287528 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele18g0702 18 4286302 4287528 Lele19g0743 19 4376206 4377534 hybridization
Lele18g0702 18 4286302 4287528 Lele20g0717 20 14208597 14209823 hybridization