Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0630 ATGAATGGGATTTGGGTAGGTATGACTTTGGTTAAAGGGAAAATATGTAGAGATGATTTGTTTGCAATTGAAAGGGTTATAAATATAAAGAAAGAAACACTTAGGAAGAAAAGGTGTGGACAGCTATACCGGAGGCATGAGGATGATTGTGAAAAAGAATACTATTTTAGAGTCAATAGAGAGCTGGCTGTGACGTCTGCCCTTGACGGAGAGAAGAAGAAGCAGAAACTTTGTGACATCAATGATGGACTTGATGAAGCTGAAACATTGATTCGGAAAATGGACCTTGAGGCTAGGAGCTTGCTGCCAAATATAAAGGCAACTCTTCTTGCCAAGTTAAGGGAATATAAAACTGATCTCAACACTTTGAAAAGTGAAGTTAAGAGAATCTCATCAGCTAATACCAACCTCTACATGGTGGCACGAGATGAGTTGCTGGAGTCTGGAGATGTTGATGTATTAATGAGAAACATTGAAAAGTCTTCGGTCCAAAATAGGACAGTATATGGAAAGAATATTGTAGCTCTTGTCTTGAAGCATTATTTTGCATCCTTATGGAGCAGTTTGGGATGA 573 0.3857 MNGIWVGMTLVKGKICRDDLFAIERVINIKKETLRKKRCGQLYRRHEDDCEKEYYFRVNRELAVTSALDGEKKKQKLCDINDGLDEAETLIRKMDLEARSLLPNIKATLLAKLREYKTDLNTLKSEVKRISSANTNLYMVARDELLESGDVDVLMRNIEKSSVQNRTVYGKNIVALVLKHYFASLWSSLG 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0630 190 SUPERFAMILY t-snare proteins 57 131 IPR010989 GO:0016020|GO:0016192
Lele19g0630 190 Pfam Vesicle transport v-SNARE protein N-terminus 58 129 IPR007705 GO:0006886|GO:0016020
Lele19g0630 190 Gene3D - 36 136 IPR038407 -
Lele19g0630 190 Coils Coil 106 133 - -
Lele19g0630 190 FunFam Vesicle transport through interaction with t-SNAREs homolog 1A 50 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0630 Lele-ChrLele19 3630354 3632525 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele18g0599 18 3576407 3578151 Lele19g0630 19 3630354 3632525 hybridization