Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0590 ATGAGCAAGTGTCCGGGCTTATATTTTGATATTGGGAAAAGGGCCAAAGATGTTCTTCACAAGAACTATGCTCACCAACCACCAATTCACTTTCACTATCAAATGATGGACTGGAATCTAGATCTTTCTTGTCAAGTGGACGAAATTGTGCCTGGACTTAGAACTCTTTGCAATTTTACACTGCCTGATTCTGGAAAGTTGGAACTGCAACACTTGGGTAACTACACTGGGATTACTGGGTGCATTGGATTAATAGGAAACCTTGAAAGAGGATATGACCCTGTGGTCAACTTCTCTGGTCTTATAGGAACAGATATTCTATCTTTGGGGGCTAAACTTGCTTACGACGTTTCAACAAGGGAATTCAGGAAAATGAATGTTGGTTTCAGCTTCAACACCGCATTCCTCGTTGCTTCTATGACCATGCATGACAGGTTTGACACAGTGAAAGCATCATTTTATCATGAAGTGAACCCTCTGACGAAGACGGCCATAGCAGCAGAAGTGAAGCATAGGATCTCAATGAATGAGACTGCTGTGACTATTGGTGCTCAGCACGCATTGCTCCCTTACACAATAGTGAAGGCTCGACTTGATACCTATGGCAAGGCTGGGGCTCTTATTCAGCAACACTTCTGGGAGAGAATTTGTATATCCATGGCTGGAGAAATTGATTTTAGGGCCGAAAGTAAACTTCCTAAGGTTGGACTCTCCCTAGCTCTAGCACCCTAG 732 0.4344 MSKCPGLYFDIGKRAKDVLHKNYAHQPPIHFHYQMMDWNLDLSCQVDEIVPGLRTLCNFTLPDSGKLELQHLGNYTGITGCIGLIGNLERGYDPVVNFSGLIGTDILSLGAKLAYDVSTREFRKMNVGFSFNTAFLVASMTMHDRFDTVKASFYHEVNPLTKTAIAAEVKHRISMNETAVTIGAQHALLPYTIVKARLDTYGKAGALIQQHFWERICISMAGEIDFRAESKLPKVGLSLALAP 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0590 243 PANTHER VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 40 242 IPR001925 GO:0005741|GO:0008308|GO:0098656
Lele19g0590 243 FunFam Mitochondrial outer membrane protein porin 1 isoform A 2 242 - -
Lele19g0590 243 Gene3D Porin 3 242 IPR023614 -
Lele19g0590 243 Pfam Eukaryotic porin 36 229 IPR027246 GO:0005741|GO:0055085
Lele19g0590 243 CDD Porin3_VDAC 5 242 IPR001925 GO:0005741|GO:0008308|GO:0098656
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0590 Lele-ChrLele19 3393776 3395025 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0970 17 20613869 20615132 Lele19g0590 19 3393776 3395025 hybridization
Lele18g0563 18 3326289 3327469 Lele19g0590 19 3393776 3395025 hybridization