Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0563 ATGATATTTTCTTTTCAGATTCTTTTCCTTGATTGCTTTCTCTCTGACCCTGATTATGACACACTTGTGATTTCATTTTTCTTAGATGTTCTTCATAAGGACTATGCTCACCAGCCACCAATTCATTTTCACTATCAAATGATGGACTGGAATCTAGATCTTTCTTGTCAAGTAGACGAAATTGTGCCTGGACTTAGAACCCTTTGCAATTTTACCCTACCTGATTCTGGGAAGTTGGAACTGCAACACTTGGGTAACTACACTGGAATTACTGGGTGCATTGGATTAATAGGAAACCTTGAAAGAGGATATGATCCTATGGTCAACTTCTCTGGTCTCATAGGAACAGATATTCTATCTTTGGGGGCTAAAATTGCTTACGAAGTTTCAGCAAGGGAATTCAGGAAGATGAATGTTGGTTTCAGCTTCAACACTGCGTTATTCGTTGCTTCTATGACCATGCATGACAGGTTTGACACAGTGAAAGCATCATTTTATCATGAGGTGAACCCTCTGACGAAGACAGCCATTGCAGCAGAAATGAAGCATAGGATCTCAATGAATGAAACCGGTGTCACTATTGGTGCTCAGCACGCGTTGCTCCCTTACACAATGGTGAAGGCTCGATTTGATACATATGGCAAGGTGGGTGCTCTTATTCAGCAACAGTTCTGGGAGAGAATTTGTATATCCATGGCTGGAGAAATTGATTTGAGGGCCGAAAGTAAACTTCCTAAGGTTGGACTCTCCCTAGCTCTAGCACCCTAG 768 0.4167 MIFSFQILFLDCFLSDPDYDTLVISFFLDVLHKDYAHQPPIHFHYQMMDWNLDLSCQVDEIVPGLRTLCNFTLPDSGKLELQHLGNYTGITGCIGLIGNLERGYDPMVNFSGLIGTDILSLGAKIAYEVSAREFRKMNVGFSFNTALFVASMTMHDRFDTVKASFYHEVNPLTKTAIAAEMKHRISMNETGVTIGAQHALLPYTMVKARFDTYGKVGALIQQQFWERICISMAGEIDLRAESKLPKVGLSLALAP 255
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0563 255 CDD Porin3_VDAC 59 254 IPR001925 GO:0005741|GO:0008308|GO:0098656
Lele18g0563 255 Gene3D Porin 29 254 IPR023614 -
Lele18g0563 255 Pfam Eukaryotic porin 48 241 IPR027246 GO:0005741|GO:0055085
Lele18g0563 255 PANTHER VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 51 254 IPR001925 GO:0005741|GO:0008308|GO:0098656
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele18g0563 Lele-ChrLele18 3326289 3327469 Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele18g0563 18 3326289 3327469 Lele19g0590 19 3393776 3395025 hybridization
Lele18g0563 18 3326289 3327469 Lele20g0857 20 15179372 15180907 hybridization